CX295437

Overview
NameCX295437
Unique NameCX295437
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length551
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295437 vs. ExPASy Swiss-Prot
Match: CAPP_MYCPA (Phosphoenolpyruvate carboxylase OS=Mycobacterium paratuberculosis GN=ppc PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 28/68 (41.18%), Postives = 49/68 (72.06%), Query Frame = 3 
Query:   48 VVSGHEKLSENNRSLRRLIESRLPYLNPMNMLQVEILKRLRQDDDNHKLRDALLITINGIAAGMRNTG 251
            +++G + L  +N +L R + +R PYL P+N LQVE+L+R R  DD+  ++  +L+T+NG+A+ +RN+G
Sbjct:  868 LITGQDNLLADNPALARSVFNRFPYLEPLNHLQVELLRRYRSGDDDELVQRGILLTMNGLASALRNSG 935
The following BLAST results are available for this feature:
BLAST of CX295437 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
CAPP_MYCPA8.875e-1141.18Phosphoenolpyruvate carboxylase OS=Mycobacterium p... [more]

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Properties
Property NameValue
Genbank descriptionC05072B12SK PhIFruit1 Citrus clementina cDNA clone C05072B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295437 ID=CX295437; Name=CX295437; organism=Citrus clementina; type=EST; length=551bp
GAGGCTGAGCTAAGGAGGGAGCTCTTACAACTGAGAAGTTCGTACTTGTG
GTTAGTGGGCATGAGAAGCTATCTGAGAATAACCGCAGTTTGAGGAGGCT
GATTGAGAGCAGACTCCCATATCTCAATCCTATGAATATGTTGCAGGTGG
AGATACTGAAGAGATTGAGACAGGATGATGATAACCATAAACTCAGAGAT
GCATTGCTCATCACTATAAATGGAATAGCTGCTGGTATGAGGAACACAGG
TTAAGTCAATTCGCTAGCTGGTTTAACACAGGTTAAGTTTAAGTGGCTTG
TATGCATATCGGGAAGACAGGTTTAGTAAAATCTCGCTTGTCATCTGCTA
ATGTATGCCGGAAACTACTCCTATTTCTATTTTTGTAATTTTCTTTTTAG
AACTGCGGCTTGATGGTTGAGGTCACAACTAAATGTACTTGACAAAGGCT
GTGTGGAAAAATTTGTGGAAAATTTTCAGTTAGTAGTAAAAAAAAAAAAA
AGAAAAAAAAATTAAGAAAAAAAAAACAAATAAAAAATAAAAAAAAAAAA
A
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