CX295447

Overview
NameCX295447
Unique NameCX295447
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length565
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_YEAST (Phosphoinositide phosphatase SAC1 OS=Saccharomyces cerevisiae GN=SAC1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 52/150 (34.67%), Postives = 79/150 (52.67%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHY---TVNRNSPSPFQLNGFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTAGVLALVKANGTQFCSRPRL 488
            ++ LWA+  D +S+ Y+GT ALK D  R GK+T  G   D ++S SRYY NN+ DG RQD+ DL  G +   T +  SP P +   +     + + +AL + G T+  F   +  S++  L     + V A     +  NG QF + P+L
Sbjct:  437 YQNLWADNADAVSVAYSGTGALKTDFTRTGKRTRLGAFNDFLNSASRYYQNNWTDGPRQDSYDLFLGGFRPHTASIKSPFPDRRPVYIQLIPMIICAALTVLGATI-FFPKDRFTSSKNLLYFAGASIVLALSTKFMFKNGIQFVNWPKL 585          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC1_DICDI (Phosphatidylinositide phosphatase SAC1 OS=Dictyostelium discoideum GN=sac1 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 4.796e-15
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLIS 245
            F+ +WA+ GD IS +Y+GT ALK D  R GK+   G++RDG +S+ RYYLNNF+DG RQD+  L +
Sbjct:  428 FKNIWADHGDAISTQYSGTGALKNDFTRTGKRNFQGVLRDGENSVKRYYLNNFKDGFRQDSYFLFT 493          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC2_HUMAN (Phosphatidylinositide phosphatase SAC2 OS=Homo sapiens GN=INPP5F PE=1 SV=3)

HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14
Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISG 248
            ++ +WA  GD IS +YAGT ALKGD  R G++ ++G+++DG++S +RYYLN F+D  RQ  +DL+ G
Sbjct:  501 YQIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYYLNRFKDAYRQAVIDLMQG 567          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: SAC2_MOUSE (Phosphatidylinositide phosphatase SAC2 OS=Mus musculus GN=Inpp5f PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.046e-14
Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISG 248
            ++ +WA  GD IS +YAGT ALKGD  R G++ ++G+++DG++S +RYYL+ F+D  RQ  +DL+ G
Sbjct:  501 YQIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYYLSRFKDAYRQAVIDLMQG 567          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: YG23_SCHPO (Uncharacterized protein C19F5.03 OS=Schizosaccharomyces pombe GN=SPBC19F5.03 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 3
Query:   48 FRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISGHYTVNRNSPSPFQLN--GFESFSYLPVASALVIGGLTLTSFSLQQGRSAQQYLSSVVWAGVTAGVLALVKANGTQFCSRPRL 488
            F  +W++  D IS+ Y+GT ALK D  R G +T  G   D ++S  RY LNNF DG RQDA DL+ G +  + N      L         Y+ +A  L++  +TL S S          L  + + G+ A  L    A+G QF + PRL
Sbjct:  424 FCNIWSDNADYISLSYSGTGALKTDFTRTGIRTRKGAFNDFVNSAKRYILNNFYDGARQDAYDLVLGQFRPDVNFRYRLDLRPLTIRCVPYILLA-CLILFFMTLFSRS-SSTILPPSILLILTFLGIVAS-LYYCFAHGLQFINWPRL 569          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: YF51_SCHPO (Uncharacterized protein C3C7.01c OS=Schizosaccharomyces pombe GN=SPAC3C7.01c PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 4.964e-12
Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = 3
Query:   33 EEYGKF----RTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDL 239
            EEY  F    R +WA  GD IS  Y GT ALKGD+ R+G +TI G  +D ++   RY LNNF DG+ QD+ DL
Sbjct:  423 EEYDSFLQDFRLIWANTGDYISDLYTGTPALKGDVTRHGTRTIFGAFKDLLNCFRRYILNNFFDGMLQDSYDL 495          
BLAST of CX295447 vs. ExPASy Swiss-Prot
Match: INP53_YEAST (Inositol-1,4,5-trisphosphate 5-phosphatase 3 OS=Saccharomyces cerevisiae GN=INP53 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 9.361e-11
Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 3
Query:   45 KFRTLWAEQGDEISIEYAGTYALKGDLVRYGKQTISGLIRDGMSSLSRYYLNNFQDGVRQDAMDLISG 248
            K  TLWA+ GD+IS  Y GT ALK    R GK +++G + D   S+SR Y+NNF D  +Q  +D + G
Sbjct:  464 KHNTLWADHGDQISQIYTGTNALKSSFSRKGKMSLAGALSDATKSVSRIYINNFMDKEKQQNIDTLLG 531          
The following BLAST results are available for this feature:
BLAST of CX295447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
SAC1_YEAST4.796e-1534.67Phosphoinositide phosphatase SAC1 OS=Saccharomyces... [more]
SAC1_DICDI4.796e-1553.03Phosphatidylinositide phosphatase SAC1 OS=Dictyost... [more]
SAC2_HUMAN2.380e-1449.25Phosphatidylinositide phosphatase SAC2 OS=Homo sap... [more]
SAC2_MOUSE9.046e-1447.76Phosphatidylinositide phosphatase SAC2 OS=Mus musc... [more]
YG23_SCHPO1.306e-1235.57Uncharacterized protein C19F5.03 OS=Schizosaccharo... [more]
YF51_SCHPO4.964e-1250.68Uncharacterized protein C3C7.01c OS=Schizosaccharo... [more]
INP53_YEAST9.361e-1145.59Inositol-1,4,5-trisphosphate 5-phosphatase 3 OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionC05072C10SK PhIFruit1 Citrus clementina cDNA clone C05072C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295447 ID=CX295447; Name=CX295447; organism=Citrus clementina; type=EST; length=565bp
GAGGCTTCCCCAAGTGCATTTCTATGTTCAGTGAGGAATATGGAAAATTC
AGAACGTTGTGGGCTGAGCAAGGCGACGAGATTAGCATCGAATATGCTGG
AACATATGCCCTGAAAGGAGACCTTGTTAGATACGGGAAGCAGACAATAT
CTGGATTGATCAGAGATGGGATGAGTTCTCTTTCAAGATACTATTTGAAC
AATTTCCAGGACGGAGTTCGACAGGATGCAATGGATCTCATAAGTGGTCA
CTATACTGTCAACAGAAACAGTCCCTCTCCATTTCAGCTCAATGGGTTCG
AATCATTCTCGTATCTCCCTGTGGCATCAGCATTGGTAATTGGAGGTTTG
ACACTGACTTCCTTCTCACTTCAACAAGGGAGAAGTGCTCAGCAATATCT
CTCTTCTGTGGTCTGGGCTGGAGTCACCGCTGGAGTACTGGCGCTGGTAA
AAGCTAACGGTACACAATTCTGTTCAAGGCCTCGTCTGTGCGGCCTTCGC
TAATATATATATATATTTTTAATCATTACGCGATTGTTATTATCTTTTCG
AGAAACAAAACTTGT
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