CX295450

Overview
NameCX295450
Unique NameCX295450
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: APX7_ORYSJ (Probable L-ascorbate peroxidase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=APX7 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 4.902e-17
Identity = 54/124 (43.55%), Postives = 62/124 (50.00%), Query Frame = 3
Query:   42 DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGP----------------WTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            DHLR+VF  +MGL DK+IV LSG HTLGR   ERSG+  P                WT   L FDNSYF E+       LL LP+D AL +DP F+   EK               H KLS LG
Sbjct:  224 DHLRKVF-YRMGLDDKEIVVLSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTAEWLKFDNSYFKEIKEKRDQDLLVLPTDAALFEDPTFKVYAEKYAEDQEAFFKDYAGAHAKLSNLG 346          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: CCPR_MAGGR (Cytochrome c peroxidase, mitochondrial OS=Magnaporthe grisea GN=CCP1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.402e-17
Identity = 54/133 (40.60%), Postives = 72/133 (54.14%), Query Frame = 3
Query:   33 QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEK------DG-----------LLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG--FAE 374
            Q  DH+R +F  +MG +D++IVAL+G H LGRCH +RSGF+GPWT +P +  N YF +LL  EK      DG           L+ LP+D  L++D  F+   +K                LKL ELG  FAE
Sbjct:  218 QRQDHVRNIF-YRMGFNDQEIVALAGAHALGRCHTDRSGFDGPWTFSPTVLTNDYF-KLLLNEKWEYKKWDGPKQYVDSKTKSLMMLPADMCLIEDKKFKEWTKKYADDNDLFFKDFSAAVLKLFELGVPFAE 348          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: APX8_ORYSJ (Probable L-ascorbate peroxidase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=APX8 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 8.362e-17
Identity = 54/124 (43.55%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   42 DHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGF---------EGP-------WTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            DHLR+VF  +MGL DK+IVALSG HTLGR   +RSG+         +GP       WT   L FDNSYF ++       LL LP+D AL +DP F+   EK               H KLS+LG
Sbjct:  223 DHLREVF-YRMGLDDKEIVALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQDLLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLG 345          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNE (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans GN=CCP1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 53/130 (40.77%), Postives = 65/130 (50.00%), Query Frame = 3
Query:   33 QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTEL---------LTG-------EKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 374
            Q  DHLR +F  +MG +D++IVALSG H +GRCH  RSGFEGPWT +P+ F N YF  L          TG           L+ LP+D ALL D  F+  V+                  KL ELG  E
Sbjct:  235 QAQDHLRFIFN-RMGFNDQEIVALSGAHAMGRCHTNRSGFEGPWTFSPVTFSNQYFALLRDEPWQWKKWTGPAQYEDKNTKTLMMLPTDMALLKDKSFKKYVDIYADNEEKFFSDFAKAFSKLIELGVPE 363          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: APX5_ORYSJ (Probable L-ascorbate peroxidase 5, chloroplastic OS=Oryza sativa subsp. japonica GN=APX5 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 57/136 (41.91%), Postives = 68/136 (50.00%), Query Frame = 3
Query:    6 GRRPAS*C*QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGP----------------WTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            GR PA+      +HLR+VF  +MGLSDK+IVALSG HTLGR   ERSG+  P                WT   L FDNSYF E+     + LL LP+D  L +D  F+   EK               H KLS LG
Sbjct:  174 GRLPAADPPSPAEHLREVF-YRMGLSDKEIVALSGAHTLGRARPERSGWGKPETKYTENGPGAPGGQSWTSEWLKFDNSYFKEIKERRDEDLLVLPTDAVLFEDSSFKIHAEKYAEDQDAFFEDYAEAHAKLSNLG 308          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: APXS_ARATH (L-ascorbate peroxidase S, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=APXS PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.426e-16
Identity = 55/123 (44.72%), Postives = 64/123 (52.03%), Query Frame = 3
Query:   45 HLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGF---------EGP-------WTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            HLR+VF  +MGL DKDIVALSG HTLGR   ERSG+         EGP       WT   L FDNSYF E+     + LL LP+D A+ +D  F+   EK               H KLS LG
Sbjct:  240 HLREVF-YRMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYTKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLG 361          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: APX6_ORYSJ (Probable L-ascorbate peroxidase 6, chloroplastic OS=Oryza sativa subsp. japonica GN=APX6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.863e-16
Identity = 56/136 (41.18%), Postives = 68/136 (50.00%), Query Frame = 3
Query:    6 GRRPAS*C*QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGP----------------WTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            GR PA+      +HLR+VF  +MGLSDK+IVALSG HTLGR   ERSG+  P                WT   L FDNSYF ++     + LL LP+D  L +D  F+   EK               H KLS LG
Sbjct:  163 GRLPAAGPPSPAEHLREVF-YRMGLSDKEIVALSGAHTLGRSRPERSGWGKPETKYTKNGPGAPGGQSWTSQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDSSFKIYAEKYAADQDAFFEDYAEAHAKLSNLG 297          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: CCPR_CRYNV (Cytochrome c peroxidase, mitochondrial OS=Cryptococcus neoformans var. grubii GN=CCP1 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.150e-16
Identity = 51/130 (39.23%), Postives = 66/130 (50.77%), Query Frame = 3
Query:   33 QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTEL---------LTG-------EKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 374
            Q  DHLR +F  +MG +D++IVALSG H +GRCH  RSGF+GPWT +P+ F N YF  L          TG       +   L+ LP+D AL+ D  F+  V+                  KL ELG  E
Sbjct:  235 QAQDHLRFIFN-RMGFNDQEIVALSGAHAMGRCHPNRSGFDGPWTFSPVTFSNQYFALLRDEPWQWKKWTGPAQFEDKKTKTLMMLPTDMALVKDKSFKKYVDIYADNEEKFFSDFAKAFSKLIELGVPE 363          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: CCPR2_MAGGR (Putative heme-binding peroxidase OS=Magnaporthe grisea GN=MGG_10368 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 9.245e-16
Identity = 57/142 (40.14%), Postives = 68/142 (47.89%), Query Frame = 3
Query:    3 RGRRPAS*C*QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL-----------TGEK----------DGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELG 365
            RGR P +   QG  H+R +F  +MG  D++IVALSG H+LGRCH   SGFEG W  NP  F N YF  LL           TG K          D L+ LP+D +L  DPVF   V+                  KL ELG
Sbjct:  129 RGRLPDAT--QGAAHVRDIF-YRMGFDDREIVALSGAHSLGRCHPANSGFEGKWVNNPTRFSNQYFRLLLSEDWREKTVAGTGLKQFVAVDEVTGDELMMLPTDLSLTSDPVFARWVKVYRDDQDLFFADFAKVFDKLMELG 267          
BLAST of CX295450 vs. ExPASy Swiss-Prot
Match: CCPR2_GIBZE (Putative heme-binding peroxidase OS=Gibberella zeae GN=FG10606 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.577e-15
Identity = 57/144 (39.58%), Postives = 68/144 (47.22%), Query Frame = 3
Query:    3 RGRRPAS*C*QGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELL-------TGEKDGLLQ--------------LPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFA 371
            RGR P +   QG +H+R +F  +MG +D++IVALSG H LGRCH   SGFEG W  NP  F N YF  LL       T  + GLLQ              LP+D AL  D  F   V+                  KL ELG A
Sbjct:  140 RGRLPDAA--QGAEHIRHIF-YRMGFNDREIVALSGAHNLGRCHTANSGFEGKWVNNPTRFSNQYFRLLLSETWTEKTIPESGLLQFSSVDQDTEEELMMLPTDIALTTDSEFSKYVQLYAKDKDVFFQDFKKAFAKLLELGIA 280          
The following BLAST results are available for this feature:
BLAST of CX295450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
APX7_ORYSJ4.902e-1743.55Probable L-ascorbate peroxidase 7, chloroplastic O... [more]
CCPR_MAGGR6.402e-1740.60Cytochrome c peroxidase, mitochondrial OS=Magnapor... [more]
APX8_ORYSJ8.362e-1743.55Probable L-ascorbate peroxidase 8, chloroplastic O... [more]
CCPR_CRYNE1.092e-1640.77Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
APX5_ORYSJ1.092e-1641.91Probable L-ascorbate peroxidase 5, chloroplastic O... [more]
APXS_ARATH1.426e-1644.72L-ascorbate peroxidase S, chloroplastic/mitochondr... [more]
APX6_ORYSJ1.863e-1641.18Probable L-ascorbate peroxidase 6, chloroplastic O... [more]
CCPR_CRYNV4.150e-1639.23Cytochrome c peroxidase, mitochondrial OS=Cryptoco... [more]
CCPR2_MAGGR9.245e-1640.14Putative heme-binding peroxidase OS=Magnaporthe gr... [more]
CCPR2_GIBZE1.577e-1539.58Putative heme-binding peroxidase OS=Gibberella zea... [more]

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Properties
Property NameValue
Genbank descriptionC05072D01SK PhIFruit1 Citrus clementina cDNA clone C05072D01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295450 ID=CX295450; Name=CX295450; organism=Citrus clementina; type=EST; length=630bp
GACGAGGCAGAAGGCCGGCTTCCTGATGCTAACAGGGTAATGATCACTTG
AGGCAAGTCTTTGGTGCTCAGATGGGCCTCAGCGACAAGGATATTGTTGC
TCTCTCTGGTGGCCACACCCTGGGAAGGTGCCACAAGGAGAGGTCTGGAT
TTGAGGGACCATGGACCCGCAACCCTCTCATTTTTGACAATTCCTACTTC
ACGGAGCTCTTGACTGGTGAGAAGGATGGTCTTCTGCAATTGCCATCCGA
CAAGGCCCTTCTGGATGACCCTGTTTTCCGCCCTCTTGTTGAGAAATATG
CTGCGGATGAGGACGCTTTCTTCGCTGATTATGCTGAGGCTCATCTCAAG
CTCTCTGAGCTAGGATTTGCTGAAGCCTAAATTTACCTGAGTAAATAAAT
GGTTGGAATGATGCCAACAACAGTGTGCCTCTATTTTATGTTTTTTGAAT
TCTCAGAAAATTCGAATTTCAAGATGTTGTTGGTGGAATTTTGTGGTTTT
GTTTTGTTGCACATGGTGGATTGTGAAAAGTTGGGTCGAATACTATGGTT
ACTATCATCCTTTAGAACTAATAATATCAACTGTTTTCAGACTAGATGTG
AATTATCCACCAAGTTTGGTTTAGCTTTTT
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