CX295454

Overview
NameCX295454
Unique NameCX295454
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length757
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295454 vs. ExPASy Swiss-Prot
Match: GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=GLR2.5 PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.342e-11
Identity = 44/132 (33.33%), Postives = 65/132 (49.24%), Query Frame = 1 
Query:   34 EVIEELSIPKSRLVALGSPEE----YAIALENRTVAAVVDERPYIDLFLSDHC-QFSVRGQEFTKSGWGFAFPRDSPLAIDMSTAILTLSENGELQRIHDKW-LRKKACXXXXXXXXXXXXXXXXFRGLFLI 411
            E ++++   +SRL    SPEE    +     N  + A  DE  YI LF++ +C ++S+    F   G+GFAFP  SPL  D+S  IL ++E   ++ I +KW L +K C                F  LFLI
Sbjct:  704 ERLKQMRFDESRLKTYNSPEEMRELFLHKSSNGGIDAAFDEVAYIKLFMAKYCSEYSIIEPTFKADGFGFAFPLGSPLVSDISRQILNITEGDAMKAIENKWFLGEKHCLDSTTSDSPIQLDHHSFEALFLI 835
The following BLAST results are available for this feature:
BLAST of CX295454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GLR25_ARATH4.342e-1133.33Glutamate receptor 2.5 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC05072D05SK PhIFruit1 Citrus clementina cDNA clone C05072D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295454 ID=CX295454; Name=CX295454; organism=Citrus clementina; type=EST; length=757bp
GATTCGGCCGAGGCCTCGTGCCGAATTCGGCACGAGGTGATTGAGGAGCT
CAGCATTCCAAAATCTAGACTTGTTGCTCTTGGCTCTCCAGAAGAATATG
CGATTGCCCTTGAGAATAGAACTGTTGCAGCTGTCGTCGATGAAAGACCA
TACATAGATCTGTTCCTCTCAGACCATTGCCAGTTTTCAGTTAGAGGCCA
AGAGTTCACAAAAAGCGGCTGGGGATTTGCATTTCCACGAGACTCTCCAT
TAGCAATTGATATGTCAACTGCCATTCTCACTCTATCTGAGAACGGTGAG
CTTCAGAGGATCCATGACAAGTGGCTCAGAAAGAAGGCTTGTAGTTCTGA
GAGCTCTCAGTCTGACTCAGAACAGCTTCAAATTCAAAGCTTCCGGGGAC
TGTTCCTTATCTGTGGGATTGCATGCTTCCTAGCTCTCCTCGCGTACTTC
TGCTTGATGTTACGCCAATTCAAAAAATACTCCGCAGAAGAATCTGCTTC
CTCTGTTCCCAGCAGCTCTCGTTCTGCACGCCTCCAAACTTTTTTATCAT
TTGCGGATGAAAAGGTAGACAGAACAAAGAGCAAGCTAAAGAGAAAACGT
GAAGATATGCCATCAAATGTTTATATGATCGAAGCTGAGCCAAAAAATGG
ATCAGCGAGAATAAATAGGGATATTTCTCAGGAGAGGGAGCAGTATAATA
ATGAAACTTGGCTCCATTAATGGTCAGTTCCATATGGTCAATAATGCTTT
TCTGAAT
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