CX295460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.773e-39 Identity = 81/123 (65.85%), Postives = 96/123 (78.05%), Query Frame = 1 Query: 256 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE--KGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 G + D+VL + +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL S S KG+L+NFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV+F R G + +L+IDW Sbjct: 171 GSSTTQNDKVLKT--REVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG--LERQLYIDW 289
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y1160_ORYSJ (B3 domain-containing protein Os11g0156000 OS=Oryza sativa subsp. japonica GN=Os11g0156000 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.844e-38 Identity = 77/107 (71.96%), Postives = 89/107 (83.18%), Query Frame = 1 Query: 298 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS-SNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKG-RLFI 612 EKEHMF+K +TPSDVGKLNRLVIPKQHAE+YFPL + + +KGL+L+FED G PWRFRYSYW SSQSYV+TKGWSR+VK+K+LDAGDVV F R G G RLFI Sbjct: 33 EKEHMFEKPLTPSDVGKLNRLVIPKQHAERYFPLGAGDAADKGLILSFEDEAGAPWRFRYSYWTSSQSYVLTKGWSRYVKEKRLDAGDVVHFERVRGSFGVGDRLFI 139
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y3158_ARATH (B3 domain-containing protein At3g11580 OS=Arabidopsis thaliana GN=ARF32 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 8.273e-38 Identity = 78/118 (66.10%), Postives = 93/118 (78.81%), Query Frame = 1 Query: 298 EKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSN-----------EKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 ++E +F+K +TPSDVGKLNRLVIPKQHAEKYFPL++++N EKG+LL+FED +GK W+FRYSYWNSSQSYV+TKGWSR+VKDK LDAGDVV F R DL RLFI W Sbjct: 24 QRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEKGMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGDVVFFQRHRFDL--HRLFIGW 139
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37 Identity = 77/109 (70.64%), Postives = 86/109 (78.90%), Query Frame = 1 Query: 301 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS---NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLA-KGRLFID 615 ++H+FDK VTPSDVGKLNRLVIPKQHAEK+FPL S KG+LLNFED GK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV F+R G+LFID Sbjct: 212 RDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFID 320
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.004e-37 Identity = 77/106 (72.64%), Postives = 87/106 (82.08%), Query Frame = 1 Query: 304 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSS-NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 E +F+K VTPSDVGKLNRLVIPK HAEK+FPL SS+ + KG+LLNFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVVSF R G +L+I W Sbjct: 185 EALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQ--DQQLYIGW 288
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y8577_ORYSJ (Putative B3 domain-containing protein Os08g0157700 OS=Oryza sativa subsp. japonica GN=Os08g0157700 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.661e-36 Identity = 75/112 (66.96%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 283 VLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 V+++ E+EHMFDKVVTPSDVGKLNRLV+PKQHAE++FP ++ G L FEDR G PWRFRYSYW SSQSYVMTKGWSRFV+ +L AGD VSF R A GR FID+ Sbjct: 61 VVVAAEREHMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAA----GTQLCFEDRAGTPWRFRYSYWGSSQSYVMTKGWSRFVRAARLSAGDTVSFSRA----ADGRYFIDY 164
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.943e-35 Identity = 77/126 (61.11%), Postives = 87/126 (69.05%), Query Frame = 1 Query: 292 SLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD------------------SSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFID 615 S +EH+FDK VTPSDVGKLNRLVIPKQHAEK+FPL + KG+LLNFED GK W+FRYSYWNSSQSYV+TKGWSRFVK+K L AGD V F+R G A +LFID Sbjct: 186 SAAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNA--QLFID 309
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.019e-35 Identity = 74/114 (64.91%), Postives = 85/114 (74.56%), Query Frame = 1 Query: 301 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSS--------SNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 +E +F+K VTPSDVGKLNRLVIPKQHAEK+FPL + S KG+L+N EDR GK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDVV F R G +L+I W Sbjct: 191 REVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTG--PDRQLYIHW 302
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.491e-34 Identity = 73/108 (67.59%), Postives = 83/108 (76.85%), Query Frame = 1 Query: 304 EHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNE---KGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFIDW 618 E +F+K VTPSDVGKLNRLVIPK AEK+FPL +N KG+LLNFED NGK WRFRYSYWNSSQSYV+TKGWSRFVK+K+L AGD++SF R K FI W Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQK--FFIGW 285
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.597e-33 Identity = 77/129 (59.69%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 256 GEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL------DSSS---NEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFID 615 G G + S +E +F+K VTPSDVGKLNRLV+PKQHAEK+FPL DS+S KG+LLNFED GK WRFRYSYWNSSQSYV+TKGWSRFV++K L AGD + F R K LFID Sbjct: 163 GRGMGARAQPTPSWAREPLFEKAVTPSDVGKLNRLVVPKQHAEKHFPLRRAASSDSASAAATGKGVLLNFEDGEGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRAGDTIVFSRSAYGPDK-LLFID 290 The following BLAST results are available for this feature:
BLAST of CX295460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295460 ID=CX295460; Name=CX295460; organism=Citrus clementina; type=EST; length=711bpback to top |