CX295460
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y2641_ORYSJ (B3 domain-containing protein Os02g0764100 OS=Oryza sativa subsp. japonica GN=Os02g0764100 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.860e-32 Identity = 65/94 (69.15%), Postives = 78/94 (82.98%), Query Frame = 1 Query: 292 SLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLD-SSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSF 570 S +E +F+K VTPSDVGKLNRL++PKQHAEK+FPL +SS+ G+LLNFED GK WRFRYS WNSSQSYV+TKGWSRFV++K L AGD + F Sbjct: 10 SWAREPLFEKAVTPSDVGKLNRLLVPKQHAEKHFPLRRTSSDASGVLLNFEDGEGKVWRFRYSCWNSSQSYVLTKGWSRFVREKGLRAGDTIVF 103
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y6078_ORYSJ (B3 domain-containing protein Os06g0107800 OS=Oryza sativa subsp. japonica GN=Os06g0107800 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.578e-31 Identity = 70/109 (64.22%), Postives = 83/109 (76.15%), Query Frame = 1 Query: 301 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEK--GLLLNFEDRNG--KPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRGVGDLAKGRLFID 615 +E+MF+KVVTPSDVGKLNRLV+PK +AEKYFPL ++ G +L FED G WRFRYSYW+SSQSYV+TKGWSR+V+DK+L AGD VSF R A RLFID Sbjct: 33 REYMFEKVVTPSDVGKLNRLVVPKHYAEKYFPLGPAARTSPAGTVLCFEDARGGDSTWRFRYSYWSSSQSYVITKGWSRYVRDKRLAAGDTVSFCR-----AGARLFID 136
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.367e-31 Identity = 64/97 (65.98%), Postives = 77/97 (79.38%), Query Frame = 1 Query: 301 KEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL-----DSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 576 +E +F+K VTPSDVGKLNRLV+PKQ AE++FP S + KG+LLNFED +GK WRFRYSYWNSSQSYV+TKGWSRFV++K L GD V+F R Sbjct: 174 REPLFEKAVTPSDVGKLNRLVVPKQQAERHFPFPLRRHSSDAAGKGVLLNFEDGDGKVWRFRYSYWNSSQSYVLTKGWSRFVREKGLRPGDTVAFSR 270
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAVL2_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana GN=At1g50680 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.418e-21 Identity = 55/121 (45.45%), Postives = 73/121 (60.33%), Query Frame = 1 Query: 244 KDIIGEGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL---DSSSNEKGLLLN--------FEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFH 573 K GE E D+ + +F K +TPSDVGKLNRLVIPK++A KY P D S E+G ++ F DR + W+FRY YW SSQS+V T+GW+ FVK+K L DV++F+ Sbjct: 137 KQARGEVNQESDKCFSCTQ---LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISADQSEKEEGEIVGSVEDVEVVFYDRAMRQWKFRYCYWKSSQSFVFTRGWNSFVKEKNLKEKDVIAFY 254
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: RAVL3_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana GN=At1g51120 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.200e-20 Identity = 52/120 (43.33%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 241 TKDIIGEGEA-EEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPL--------DSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFH 573 +K ++G GE +E S + +F K +TPSDVGKLNRLVIPK++A KY P ++S + + + F DR + W+FRY YW SSQS+V T+GW+ FVK+K L D++ F+ Sbjct: 155 SKQVLGGGEGGQESNKCFSCTQ--LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQWKFRYCYWRSSQSFVFTRGWNGFVKEKNLKEKDIIVFY 272
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=2 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.052e-12 Identity = 37/91 (40.66%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 310 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 576 +F+K+++ SD G++ RLV+PK+ AE YFP + S +GL L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F R Sbjct: 452 LFEKMLSASDAGRIGRLVLPKKCAEAYFP--AISQAEGLPLKVQDATGKEWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR 539
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: ARFC_ARATH (Auxin response factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.571e-12 Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 1 Query: 259 EGEAEEDRVLISLEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFHRG 579 +G E+ VL HMF K +T SD +P++ AE FP LD S L D +G WRFR+ Y + +++T GWS FV KKL +GD V F RG Sbjct: 141 DGGEEDYEVLKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRG 248
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.970e-12 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 310 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 576 +F+KV++ SD G++ RLV+PK AE YFP S +G L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F R Sbjct: 362 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISQPEGRPLTIQDAKGKEWHFQFRFWPNNNSRMYVL-EGVTPCIQSLQLQAGDTVTFSR 449
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 38/91 (41.76%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 310 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 576 +F+KV++ SD G++ RLV+PK AE YFP S +GL L +D GK W F++ +W N+S+ YV+ +G + ++ +L AGD V+F R Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFP--PISLPEGLPLKIQDIKGKEWVFQFRFWPNNNSRMYVL-EGVTPCIQSMQLQAGDTVTFSR 372
BLAST of CX295460 vs. ExPASy Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 37/91 (40.66%), Postives = 58/91 (63.74%), Query Frame = 1 Query: 310 MFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKPWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDVVSFHR 576 +F+K ++ SD G++ RLV+PK AE YFP S S +G+ L +D G+ W F++ YW N+S+ YV+ +G + ++ L AGD V+F R Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQS--EGIPLKIQDVRGREWTFQFRYWPNNNSRMYVL-EGVTPCIQSMMLQAGDTVTFSR 381 The following BLAST results are available for this feature:
BLAST of CX295460 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295460 ID=CX295460; Name=CX295460; organism=Citrus clementina; type=EST; length=711bpback to top |