CX295467

Overview
NameCX295467
Unique NameCX295467
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
PhIFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX295467 vs. ExPASy Swiss-Prot
Match: DFRA_SYNY3 (Putative dihydroflavonol-4-reductase OS=Synechocystis sp. (strain PCC 6803) GN=dfrA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13
Identity = 65/206 (31.55%), Postives = 110/206 (53.40%), Query Frame = 2 
Query:   53 VTGANGFIGTWVVRTLLEKGYTNIHAAIFPGTDASHLFSLPGATKLNVRVYEANILDNEAISRAIEGCKGVFHLASPNTLDDPKDPEKELLIPAVQGTLNVLEAAKKFGVRRVVLTSSISSIVPNPNWPQGKVIDETSWTDLDFCKSHKIWYSMSKTLAEKAAWEFAEKNGTDVVAIHPATSLGPF---PQPYVNASGAVLQRLLQ 661
            VTG  GF+G  +VR LLE+GY  + A +   +   +L +LP         +    L++  + + ++GC+G+FH+A+  +L   KD E  L    V GT N+L  A+K G+ R V TSS+++I    +   G+  DE+  + ++        Y  SK  AE+ A   A++ G D+V ++P+T +GP+   P P    +G ++ R L+
Sbjct:   15 VTGGTGFVGANLVRHLLEQGY-QVRALVRASSRPDNLQNLPID-------WVVGDLNDGDLHQQMQGCQGLFHVAAHYSLWQ-KDREA-LYRSNVLGTRNILACAQKAGIERTVYTSSVAAIGVKGD---GQRADESYQSPVEKLIGA---YKQSKYWAEQEALTAAQQ-GQDIVIVNPSTPIGPWDIKPTP----TGEIILRFLR 199
The following BLAST results are available for this feature:
BLAST of CX295467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
DFRA_SYNY32.434e-1331.55Putative dihydroflavonol-4-reductase OS=Synechocys... [more]

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Properties
Property NameValue
Genbank descriptionC05072E06SK PhIFruit1 Citrus clementina cDNA clone C05072E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295467 ID=CX295467; Name=CX295467; organism=Citrus clementina; type=EST; length=709bp
GAGGCATATTAAAGAGAAAAGGATGAACGGGCCAGAAAAGGAAGTAGTTT
GCGTGACTGGAGCCAACGGGTTCATCGGAACATGGGTGGTCCGAACCCTT
CTAGAAAAAGGCTACACCAACATTCACGCTGCCATCTTTCCCGGCACTGA
CGCATCCCACTTGTTCAGCCTCCCAGGCGCCACCAAGCTCAACGTCCGTG
TTTACGAGGCCAATATCTTAGACAACGAAGCAATTTCCAGGGCCATCGAG
GGTTGCAAGGGGGTCTTCCATCTTGCCTCTCCTAACACCCTGGATGATCC
CAAGGACCCCGAAAAGGAGCTGCTCATTCCTGCTGTTCAAGGCACCCTCA
ATGTCTTAGAGGCTGCCAAGAAGTTTGGTGTCAGGCGTGTGGTGCTCACC
AGCTCCATTTCTTCCATTGTGCCTAATCCCAATTGGCCTCAAGGCAAGGT
CATTGATGAAACTTCTTGGACCGACCTTGACTTTTGCAAGTCTCACAAGA
TATGGTATTCAATGTCAAAGACACTAGCAGAAAAAGCAGCATGGGAATTT
GCAGAGAAGAATGGAACGGATGTGGTGGCAATCCATCCAGCCACATCTCT
TGGGCCATTTCCGCAGCCTTACGTGAACGCGAGCGGAGCTGTGCTGCAGC
GTTTGTTGCAGGGTTCAAAAGACACTCAAGAGCATTACTGGCTGGGAGCT
GTGCATGTT
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