CX295474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_HUMAN (60S ribosomal protein L9 OS=Homo sapiens GN=RPL9 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39 Identity = 82/132 (62.12%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_BOVIN (60S ribosomal protein L9 OS=Bos taurus GN=RPL9 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.009e-39 Identity = 82/132 (62.12%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_ICTPU (60S ribosomal protein L9 OS=Ictalurus punctatus GN=rpl9 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.720e-39 Identity = 83/136 (61.03%), Postives = 96/136 (70.59%), Query Frame = -1 Query: 238 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPILGEE 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I +EIRNF GEK +R+V M GV S KDELVL+GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK ++ E Sbjct: 56 RVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNFLGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTVVEPE 191
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_PONAB (60S ribosomal protein L9 OS=Pongo abelii GN=RPL9 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.247e-39 Identity = 82/132 (62.12%), Postives = 94/132 (71.21%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 ++D W+G+RK A +RT SHV N+I GVT G+RYKMR VYAHFPIN I N +EIRNF GEK +R+V M GV S KDEL+L GNDIELVS AALI Q VKNKDIRKFLDGIYVSEK + Sbjct: 56 RVDEWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILGGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9_CAEEL (60S ribosomal protein L9 OS=Caenorhabditis elegans GN=rpl-9 PE=1 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 5.534e-38 Identity = 77/133 (57.89%), Postives = 98/133 (73.68%), Query Frame = -1 Query: 247 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPIL 645 ++ WFG RK AAIRT SH+ N+I GVT G+RYKMR VYAHFPIN ++ + N+ +EIRNF GEK VR+V + +GV S KDE+V++GND++ VS+ AA I Q VK KDIRKFLDGIYVSEK+ I+ Sbjct: 54 RVRKWFGVRKELAAIRTVCSHIKNMIKGVTVGFRYKMRSVYAHFPINVTLQDGNRTVEIRNFLGEKIVRRVPLPEGVIATISTAQKDEIVVEGNDVQFVSQAAARIQQSTAVKEKDIRKFLDGIYVSEKTTIV 186
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9B_SCHPO (60S ribosomal protein L9-B OS=Schizosaccharomyces pombe GN=rpl9b PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37 Identity = 77/132 (58.33%), Postives = 96/132 (72.73%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 K W GSRK +A IRTA S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNF GE+ R + L GVTV S VKDE++++GN +E VS+ AA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 54 KFIVWHGSRKHNACIRTAYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIIIEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9A_SCHPO (60S ribosomal protein L9-A OS=Schizosaccharomyces pombe GN=rpl9a PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 7.991e-37 Identity = 76/132 (57.58%), Postives = 95/132 (71.97%), Query Frame = -1 Query: 250 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPI 645 K W GSRK +A IR+ S + N+I GVT+G+RYKMR VYAHFPIN ++ N +EIRNF GE+ R + L GVTV S VKDE++L+GN +E VS+ AA I Q C+V+NKDIRKFLDGIYVSE+ I Sbjct: 54 KFIVWHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9B_YEAST (60S ribosomal protein L9-B OS=Saccharomyces cerevisiae GN=RPL9B PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.037e-36 Identity = 80/135 (59.26%), Postives = 98/135 (72.59%), Query Frame = -1 Query: 247 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEKSPIL 645 K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNF G+KK+R V + DGVT+ S VKDE+VL GN +E VS+ AA + Q C V+NKDIRKFLDGIYVS K I+ Sbjct: 54 KVAVHNGDRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFIV 188
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL9A_YEAST (60S ribosomal protein L9-A OS=Saccharomyces cerevisiae GN=RPL9A PE=1 SV=2) HSP 1 Score: 151.369 bits (381), Expect = 3.966e-36 Identity = 79/131 (60.31%), Postives = 96/131 (73.28%), Query Frame = -1 Query: 259 KIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNN--KAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVKDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEK 645 K+ G RK AA+RT S V N+ITGVTKGY+YKMR+VYAHFPIN +I + K IE+RNF G+KK+R V + DGVT+ S VKDE+VL GN +E VS+ AA + Q C V+NKDIRKFLDGIYVS K Sbjct: 54 KVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHK 184
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL6_HYPBU (50S ribosomal protein L6P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl6p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25 Identity = 59/129 (45.74%), Postives = 86/129 (66.67%), Query Frame = -1 Query: 259 IDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKV-KDELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEK 642 ++A+F +R+ A + T +H+ N+ITGVTKG+RYK++ VY+HFP+ + + IE NF GEK R ++ GVTV KV KD+++++G DIE V + AA I Q VK+KD R F+DGIY+ EK Sbjct: 60 VEAYFANRRVKALVGTIAAHIENMITGVTKGFRYKLKIVYSHFPVTVKVQGDKVVIE--NFLGEKAPRIAKIMPGVTV----KVQKDDVIVEGIDIEAVGQTAANIEQATKVKDKDRRVFIDGIYIYEK 182 The following BLAST results are available for this feature:
BLAST of CX295474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295474 ID=CX295474; Name=CX295474; organism=Citrus clementina; type=EST; length=660bpback to top |