CX295474
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL6_PICTO (50S ribosomal protein L6P OS=Picrophilus torridus GN=rpl6p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.381e-11 Identity = 42/130 (32.31%), Postives = 66/130 (50.77%), Query Frame = -1 Query: 268 AQAKIDAWFGSRKTSAAIRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYV 654 + KI ++ T + T S LI GVTKG+ Y M+ + HFP+ S+ + +E NF GEK R ++DG V VK D + ++G D + AA I + ++++ D R F DGI++ Sbjct: 50 SSVKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMRVSVRGDKLIVE--NFLGEKSPRSAKIVDGCKV----SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
BLAST of CX295474 vs. ExPASy Swiss-Prot
Match: RL6_THEVO (50S ribosomal protein L6P OS=Thermoplasma volcanium GN=rpl6p PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.836e-11 Identity = 40/116 (34.48%), Postives = 63/116 (54.31%), Query Frame = -1 Query: 259 IRTALSHVGNLITGVTKGYRYKMRFVYAHFPINASIGNNNKAIEIRNFFGEKKVRKVDMLDGVTVIRSDKVK-DELVLDGNDIELVSRFAALINQKCHVKNKDIRKFLDGIYVSEK 603 + T S + N++ G+ +G++Y+M+ Y+HFP+ S+ K + I NFFGE+ R +++ V VK D L L+G + V AA I + +K D R F DGIY+ K Sbjct: 67 VGTWASEISNMVKGLKEGFQYEMKIDYSHFPMRVSV--KGKTVVIENFFGERSPRTAEIVGETQV----SVKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176 The following BLAST results are available for this feature:
BLAST of CX295474 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295474 ID=CX295474; Name=CX295474; organism=Citrus clementina; type=EST; length=660bpback to top |