CX295555

Overview
NameCX295555
Unique NameCX295555
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length702
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_SCHPO (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Schizosaccharomyces pombe GN=etr1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.655e-22
Identity = 65/194 (33.51%), Postives = 96/194 (49.48%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXT----------RLAPGDWVIPSPPSSGTW--------QSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            +KA+ Y   G P  V++ +     +  +N V V+ LA+PINPSDIN+I+GVYP +P                                  +PG W I    + G+W        +S V  D+S +  I++      AAT+ VNP TA  +L+    LN GD  +Q+GA S+VG   IQ+A+H G  SIN++R+R
Sbjct:   21 AKAIAYSEYGNPKEVLRAVSYNVPKCSKNQVNVRFLASPINPSDINQIQGVYPSKPPFTNDVCSSKPSAVAGNEGLVEVVDVGDQFKGTFSPGQWAILGSVNLGSWRTEMNIDGRSLVPVDKSAFPSIAE------AATLSVNPCTAYCLLQHVVQLNKGDWFIQDGANSMVGIATIQLAKHFGYKSINVVRNR 208          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: MECR2_CAEEL (Probable trans-2-enoyl-CoA reductase 2, mitochondrial OS=Caenorhabditis elegans GN=Y48A6B.9 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.814e-21
Identity = 61/177 (34.46%), Postives = 95/177 (53.67%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVIKMIELP-PVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            S+A++Y + G P  V+++  +  P E    +  V+ LA+PINP DINRI+G Y VR ++P                  +R   GD V     ++  W  + V D     K+    P++ AAT+++NP TA  ML+ +  L  GD I+QN A S VG+ +I++ +  G  SINI+R+R
Sbjct:    7 SQALIYRKFGDPLKVLQLETVEVPAEPGSGECLVEWLASPINPLDINRIQGNYAVRAELPVIGGSEGVGRVVKAGSG-SRFKSGDHVTIFSANTPIWTEFGVVDDDELVKLDNRIPLDLAATLMINPPTAWIMLKKYVNLQKGDYIIQNSANSGVGRSVIEMCKALGYKSINIVRNR 182          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR2_CANTR (Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 2, mitochondrial OS=Candida tropicalis GN=ETR2 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21
Identity = 67/199 (33.67%), Postives = 99/199 (49.75%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSP-----------MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            ++AV+Y + G P  V+  +  E+    +  N+V VK L +PINPSDIN+I+GVYP +P         +                    + L  GDWVIPS  + GTW+++ + +   + K+   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+   QI +    +SI++IRDR
Sbjct:   26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPINPSDINQIQGVYPSKPAKTTGFGTAEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 224          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_CANTR (Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1, mitochondrial OS=Candida tropicalis GN=ETR1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.278e-21
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVI--KMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSP-----------MEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            ++AV+Y + G P  V+  +  E+    +  N+V VK L +P+NPSDIN+I+GVYP +P         +                    + L  GDWVIPS  + GTW+++ + +   + K+   +            +   ATI VNPLTA  ML  +  L  G D  +QNG TS VG+   QI +    +SI++IRDR
Sbjct:   26 AQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR 224          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR2_DEBHA (Probable trans-2-enoyl-CoA reductase 2, mitochondrial OS=Debaryomyces hansenii GN=ETR2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21
Identity = 65/199 (32.66%), Postives = 98/199 (49.25%), Query Frame = 3
Query:  132 SKAVVYEREGPPDSVIKMI--ELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVP---------XXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVV-----------KDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSG-DSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            ++AVVY + G P  V+K +  E+    +  N + VK L +P+NPSDIN+I+GVYP +P+                             +    GDW +P+  + GTW+++++            +QS  +       +   ATI VNPLTA  ML  +  L  G D  +QNG  S VG+   QI+   GI+SI++IRDR
Sbjct:   26 AQAVVYAQHGEPKDVLKTLKYEIDDDNLDSNSIIVKTLGSPVNPSDINQIQGVYPSKPEKTTELGSNEPVAVCGNEGLFEILKVGDNVSNFKVGDWCVPTSVNMGTWRTHMLCGGDEMTKIPNPEQSKANGKPSGLSVNQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGNSAVGKYATQISNLLGINSISVIRDR 224          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_ASHGO (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Ashbya gossypii GN=ETR1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.218e-19
Identity = 65/192 (33.85%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  126 PPSKAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSY-VVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLN-SGDS-IVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            P  K+++Y    P D   V+K+    P    +  + ++ LA PINPSDIN+++GVYP  P         K                     RLA GDWVIP   ++GTW +Y   +D     K++    +  AATI VN  TA +++ D+   + SG+  IVQN  TS V + + Q+A+ RG+ ++++IRDR
Sbjct:   17 PLFKSLLYSSHDPADCTQVLKVHSYTPKVGADESILLRTLAFPINPSDINQLQGVYPSVPEKTLDYSTEKPAAIAGNEGVFEVMSVPQGERRLAVGDWVIPLYSNTGTWTNYQTCRDAGTLVKVN-GLDLYTAATIAVNGCTAYQLVNDYVQWDPSGNEWIVQNAGTSAVSKIVTQVAQARGVKTLSVIRDR 207          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_KLULA (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Kluyveromyces lactis GN=ETR1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.217e-17
Identity = 59/188 (31.38%), Postives = 93/188 (49.47%), Query Frame = 3
Query:  135 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRP---------KVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLN--SGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            K+++Y      D   V+K+    P +  E  + +K LA PINPSDIN++EGVYP +P         +                    + L PGD VIP   + GTW +Y   D+       +   +  AAT+ VN  TA +++ D+   +    D +VQN  TS V + + QIA+ + I+++++IRDR
Sbjct:   25 KSLIYSSHDSQDCTKVLKVHNYKPKKGSETSIVLKTLAFPINPSDINQLEGVYPSKPDKVTDYSTDEPSAIAGNEGVFEVVSVPSSVSTLKPGDKVIPLQANFGTWSTYRTCDKESDLIKIEGVDIYTAATVAVNGCTAYQLVNDYINWDPKGNDWLVQNAGTSSVSKIVTQIAKAKNINTLSVIRDR 212          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_CANGA (Probable trans-2-enoyl-CoA reductase, mitochondrial OS=Candida glabrata GN=ETR1 PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 56/190 (29.47%), Postives = 91/190 (47.89%), Query Frame = 3
Query:  135 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPV-----------RPKVPXXXXXXXXXXXXXXXXXXTRLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS--IVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            K+++Y      D   V+ +    P +     V ++ LA PINPSDIN+++GVYP            +P                       L  GDWVIP   + GTW +Y V D++          +  AAT+ VN  TA +++ ++   N+  +  ++QN  TS V + + QIA+ RG+ ++++IRDR
Sbjct:   26 KSIIYNSHSLEDCTGVLSVHNYKPKQDLNKSVVLRTLAFPINPSDINQLQGVYPSLPEKTLDYSTEKPSAIAGNEGLFEVVSLPEHGDHGELKVGDWVIPVQANQGTWSNYRVFDKASDLIKVNGLDLYSAATVSVNGCTAYQLVNNYVDWNADGNEWLIQNAGTSGVSKFVTQIAKARGVKTLSVIRDR 215          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_YEAST (Enoyl-[acyl-carrier protein] reductase [NADPH, B-specific], mitochondrial OS=Saccharomyces cerevisiae GN=ETR1 PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 58/190 (30.53%), Postives = 89/190 (46.84%), Query Frame = 3
Query:  135 KAVVYEREGPPD--SVIKMIELPPVEVKENDVCVKMLAAPINPSDINRIEGVYPVRPKVPXXXXXXXXXXXXXXXXXXT-----------RLAPGDWVIPSPPSSGTWQSYVVKDQSVWHKISKDSPMEYAATIIVNPLTALRMLEDFTTLNSGDS--IVQNGATSIVGQCIIQIARHRGIHSINIIRDR 659
            K+++Y      D   V+ +    P +     + +K LA PINPSDIN+++GVYP RP+                                 L  GD VIP   + GTW +Y V   S       D  +  AAT+ VN  T  +++ D+   NS  +  I+QN  TS V + + Q+A+ +GI ++++IRDR
Sbjct:   21 KSLIYSTHEVEDCTKVLSVKNYTPKQDLSQSIVLKTLAFPINPSDINQLQGVYPSRPEKTYDYSTDEPAAIAGNEGVFEVVSLPSGSSKGDLKLGDRVIPLQANQGTWSNYRVFSSSSDLIKVNDLDLFSAATVSVNGCTGFQLVSDYIDWNSNGNEWIIQNAGTSSVSKIVTQVAKAKGIKTLSVIRDR 210          
BLAST of CX295555 vs. ExPASy Swiss-Prot
Match: ETR1_DEBHA (Probable trans-2-enoyl-CoA reductase 1, mitochondrial OS=Debaryomyces hansenii GN=ETR1 PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.677e-16
Identity = 55/167 (32.93%), Postives = 84/167 (50.30%), Query Frame = 3
Query:  222 VCVKMLAAPINPSDINRIEGVYPVRPK--------VPXXXXXXXXXXXXXXXXXX-TRLAPGDWVIPSPPSSGTWQSYVV------KDQSVWHKIS----KDSPMEYAATIIVNPLTALRMLEDFTT---LNSGDSIVQNGATSIVGQCIIQIARHRGIHSINIIRD 656
            V ++ LA PINPSD+N++ G Y  +P         VP                   T    GDWVIP  PS GTW+++ +      ++   + K+S    K   +  AAT+ +NP TA ++++ F         D I+QNG  S VG+ ++QIA+ R I +I++IRD
Sbjct:   38 VVIQALATPINPSDLNQLAGTYASKPNFTSELDTPVPVAIGGNEGLYKVIEVGSDVTSYKNGDWVIPKMPSFGTWRTHALVTLDKPENPDPFIKVSSEDDKSIDLTQAATVSINPSTAYQLIDQFIKDWDPKGNDWIIQNGGNSQVGKFVVQIAKIRNIKTISVIRD 204          
The following BLAST results are available for this feature:
BLAST of CX295555 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
ETR1_SCHPO3.655e-2233.51Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
MECR2_CAEEL1.814e-2134.46Probable trans-2-enoyl-CoA reductase 2, mitochondr... [more]
ETR2_CANTR4.041e-2133.67Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s... [more]
ETR1_CANTR5.278e-2133.17Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s... [more]
ETR2_DEBHA6.894e-2132.66Probable trans-2-enoyl-CoA reductase 2, mitochondr... [more]
ETR1_ASHGO2.218e-1933.85Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_KLULA1.217e-1731.38Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_CANGA1.757e-1629.47Probable trans-2-enoyl-CoA reductase, mitochondria... [more]
ETR1_YEAST5.112e-1630.53Enoyl-[acyl-carrier protein] reductase [NADPH, B-s... [more]
ETR1_DEBHA6.677e-1632.93Probable trans-2-enoyl-CoA reductase 1, mitochondr... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05073D12SK DroRLeaf1 Citrus clementina cDNA clone C05073D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295555 ID=CX295555; Name=CX295555; organism=Citrus clementina; type=EST; length=702bp
TGGCATTGGCAAGATCAGTGGCGCTAAAACTGATAAACAGATCAATTTCA
GCAGCAAGTATCGAATGGGCCCGTGCTCGTCGGGTCCAAGCCCAACGAGT
TCGGGCCTTCTCGGCTCTAATGTCGCCGCCGTCAAAGGCTGTCGTCTACG
AGCGGGAGGGCCCGCCCGACTCAGTCATCAAAATGATAGAGTTACCGCCG
GTGGAAGTGAAAGAGAATGACGTGTGCGTTAAAATGTTAGCTGCTCCTAT
CAACCCTTCTGATATCAATCGCATTGAAGGGGTGTACCCGGTGAGGCCAA
AAGTGCCAGCAGTTGGAGGGTATGAGGGTGTTGGAGAGGTGTATTCTGTC
GGCTCTGCAGTTACGAGACTGGCCCCCGGTGATTGGGTCATCCCCTCTCC
ACCCTCATCAGGAACATGGCAGAGTTATGTTGTGAAAGATCAGAGTGTCT
GGCACAAAATTAGTAAAGATTCACCTATGGAGTATGCTGCTACCATTATT
GTTAATCCTTTGACTGCTTTAAGAATGCTTGAAGACTTCACAACTCTAAA
TTCAGGAGATTCTATCGTCCAAAATGGTGCAACAAGCATTGTGGGGCAGT
GCATAATTCAGATTGCAAGACATCGTGGCATCCATAGCATTAATATTATA
AGGGATAGGGTCAGATGAAGCTAAGGAAAGCTTAAGGACTTGGTGCAGAT
GA
back to top