CX295556

Overview
NameCX295556
Unique NameCX295556
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length715
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACHK (Chaperone protein dnaJ OS=Bacillus thuringiensis subsp. konkukian GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCZ (Chaperone protein dnaJ OS=Bacillus cereus (strain ZK / E33L) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCQ (Chaperone protein dnaJ OS=Bacillus cereus (strain Q1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC7 (Chaperone protein dnaJ OS=Bacillus cereus (strain AH187) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC3 (Chaperone protein dnaJ OS=Bacillus cereus (strain 03BB102) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC1 (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 10987) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
[Close]
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC0 (Chaperone protein dnaJ OS=Bacillus cereus (strain AH820) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.871e-13
Identity = 34/63 (53.97%), Postives = 51/63 (80.95%), Query Frame = 2 
Query:  200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388
            D+Y+VLG+++ A+  +IK+AYR LA+KYHPDVSK+  A+E FK ++ AYEVLS++  R +YD+
Sbjct:    5 DYYEVLGLSKGASKDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQ 67
The following BLAST results are available for this feature:
BLAST of CX295556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 163
Match NameE-valueIdentityDescription
DNAJ_BACCR1.433e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC41.433e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC21.433e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACHK1.871e-1353.97Chaperone protein dnaJ OS=Bacillus thuringiensis s... [more]
DNAJ_BACCZ1.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACCQ1.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC71.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC31.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC11.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC01.871e-1353.97Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05073E01SK DroRLeaf1 Citrus clementina cDNA clone C05073E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295556 ID=CX295556; Name=CX295556; organism=Citrus clementina; type=EST; length=715bp
GAGGCTCCTGGTGGGACCCATAACTCCCACTACCGGCTCCGATGCGTTCT
CCTCCATCATCAAAAACAGTTTCCTGATCTCCTCTCCTCGCCGCAGCACC
ACCGGCAGTAACCGCAACAGAAGAACCCGCCACCGCTTGGTGGTCGCGTC
ATCGTCTTGGTCATCATCCGCCGCGGCGGCGGCCATAAACGGCGAGCCGG
ACCATTACAAAGTTCTGGGCGTCGCTCAAAGTGCCACGCTAGCTGATATT
AAGAGGGCTTATCGCCTCCTCGCTCGTAAGTATCATCCCGACGTTAGCAA
GGATTCACGAGCGGTTGAAGTGTTCAAGACCATCCGTTGTGCTTATGAAG
TATTATCTAATGAAGTAACAAGAATTAAGTATGATCGGGCACTCAAATTT
CGAACGGATAGTGACAGATCACGTAGAGGAAACAGGAGGTACAGCAGTGA
ATTTGAAGACGGGGTAAGGATCTCTACATGGGCTGAACTGAGGCGAAAAC
TTCAATATGAGAGATATTGGAAAAATTATAACTCAAAAGAAGAGTATTCT
TCCTTCTATCGTAAAGCACCAGTCCGGGAAGTTCAAGAGGAAAACCCAGG
TGATAAGAGAGGCTCCTTTACTGCAGTGCTAAGATCAGCATTTATCTCTT
TATTCTTACTGAAGGTCTTTGGGTCCCAACTATCCCTCACTTTTAGTAGC
CTCACGGCTTTGTTT
back to top