CX295556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BREBN (Chaperone protein dnaJ OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D Y+VLGVA+ A +IK+AYR LAR+YHPDV+K++ A E FK ++ AY++LS R +YDR Sbjct: 4 DLYEVLGVAKDADADEIKKAYRKLARQYHPDVNKEADAEEKFKEVKDAYDILSEPQKRAQYDR 66
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_COXBU (Curved DNA-binding protein OS=Coxiella burnetii GN=cbpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 385 D+YK+LGV++ AT +IK++YR LARKYHPDVS + A E FK ++ AYEVL + R YD Sbjct: 5 DYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYD 66
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_COXBR (Curved DNA-binding protein OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 385 D+YK+LGV++ AT +IK++YR LARKYHPDVS + A E FK ++ AYEVL + R YD Sbjct: 5 DYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYD 66
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_COXBN (Curved DNA-binding protein OS=Coxiella burnetii (strain Dugway 5J108-111) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.609e-12 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 385 D+YK+LGV++ AT +IK++YR LARKYHPDVS + A E FK ++ AYEVL + R YD Sbjct: 5 DYYKILGVSRDATADEIKKSYRKLARKYHPDVSSEPNAEEKFKQVKEAYEVLKDVEKRKAYD 66
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_RICAH (Chaperone protein dnaJ OS=Rickettsia akari (strain Hartford) GN=dnaJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 36/87 (41.38%), Postives = 54/87 (62.07%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRRYSSEFED 460 D+YK+LGV+++A+ AD+K+AY LA++YHPD + D A + FK I AY+VL +E R YDR + +SR G ++ D Sbjct: 4 DYYKILGVSKTASQADLKKAYLKLAKQYHPDTTDDKDAEKKFKEINRAYDVLKDEQKRAAYDRFGHDTFQNQQSRGGGGSHAGFHHD 90
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 36/63 (57.14%), Postives = 44/63 (69.84%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D+Y+ LGV + A +IKRAYR LARKYHPDV+K+ A E FK I AYEVLS R +YD+ Sbjct: 4 DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQ 66
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_SALTY (Curved DNA-binding protein OS=Salmonella typhimurium GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRR----YSSEFEDGVRISTWAELRRKLQYERYWKNYNSKEEYSSF 556 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D +R+ + Y++E D + S + + R + + ++ + E + F Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVF 127
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_SALTI (Curved DNA-binding protein OS=Salmonella typhi GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRR----YSSEFEDGVRISTWAELRRKLQYERYWKNYNSKEEYSSF 556 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D +R+ + Y++E D + S + + R + + ++ + E + F Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVF 127
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_SALSV (Curved DNA-binding protein OS=Salmonella schwarzengrund (strain CVM19633) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRR----YSSEFEDGVRISTWAELRRKLQYERYWKNYNSKEEYSSF 556 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D +R+ + Y++E D + S + + R + + ++ + E + F Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVF 127
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_SALPK (Curved DNA-binding protein OS=Salmonella paratyphi A (strain AKU_12601) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRRGNRR----YSSEFEDGVRISTWAELRRKLQYERYWKNYNSKEEYSSF 556 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D +R+ + Y++E D + S + + R + + ++ + E + F Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNRQFQQHEGQPYNAEDFDDIFSSIFGQHGRHSHHRHAARGHDIEIEVAVF 127 The following BLAST results are available for this feature:
BLAST of CX295556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295556 ID=CX295556; Name=CX295556; organism=Citrus clementina; type=EST; length=715bpback to top |