CX295556
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_ECOSM (Curved DNA-binding protein OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRR-----GNRRYSSEFED 460 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D SR+ G + +F+D Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDD 96
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_ECOLU (Curved DNA-binding protein OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRR-----GNRRYSSEFED 460 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D SR+ G + +F+D Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDD 96
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_ECO7I (Curved DNA-binding protein OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRR-----GNRRYSSEFED 460 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D SR+ G + +F+D Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDD 96
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_ECO5E (Curved DNA-binding protein OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRR-----GNRRYSSEFED 460 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D SR+ G + +F+D Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDD 96
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: CBPA_ECO57 (Curved DNA-binding protein OS=Escherichia coli O157:H7 GN=cbpA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.019e-12 Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTDSDRSRR-----GNRRYSSEFED 460 D+Y ++GV + L IK AYR LARKYHPDVSK+ A FK + A+EVLS+E R +YD+ + R D SR+ G + +F+D Sbjct: 5 DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFSRQFQHGDGQSFNAEDFDD 96
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 32/63 (50.79%), Postives = 50/63 (79.37%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D+Y+VLG+++SA+ +IK+AYR L+++YHPD++K++ A E FK I AYEVLS+ R +YD+ Sbjct: 5 DYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQ 67
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_DICT6 (Chaperone protein dnaJ OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D+Y++LGV ++AT +IK+AYR L R+YHPD++KD A E FK I AYEVLS+ R +YD+ Sbjct: 6 DYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQKRAQYDQ 68
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 31/63 (49.21%), Postives = 51/63 (80.95%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D+Y+VLGV++SA+ +IK+AYR L++KYHPD++K++ + E FK ++ AYE LS++ R +YD+ Sbjct: 5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQ 67
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DJC16_PONAB (DnaJ homolog subfamily C member 16 OS=Pongo abelii GN=DNAJC16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 200 DHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 D YKVLGV+++A+ ADIK+AY+ LAR++HPD +KD A + F I AYE+LSNE R YD+ Sbjct: 29 DPYKVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDKFIQISKAYEILSNEEKRSNYDQ 91
BLAST of CX295556 vs. ExPASy Swiss-Prot
Match: DJC16_CHICK (DnaJ homolog subfamily C member 16 OS=Gallus gallus GN=DNAJC16 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.861e-12 Identity = 35/65 (53.85%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 194 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDR 388 E D Y+VLGV +S++ ADIK+AY+ LAR++HPD +KD A + F I AYE+LSNE R +DR Sbjct: 26 ERDPYRVLGVGRSSSQADIKKAYKRLARQWHPDKNKDPGAEDKFIQISKAYEILSNEEKRANFDR 90 The following BLAST results are available for this feature:
BLAST of CX295556 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295556 ID=CX295556; Name=CX295556; organism=Citrus clementina; type=EST; length=715bpback to top |