CX295559
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS7_NICAL (Ribonuclease S-7 OS=Nicotiana alata PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21 Identity = 64/203 (31.53%), Postives = 95/203 (46.80%), Query Frame = 3 Query: 117 ILIKLFFIQYLSVLCAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSG---NGITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPD-GSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASN 713 +L L F+ LS + A F++ VLQWP ++C T P +F IHGLWP+ N + + C F + + + K WP L FW HE+ KHG C N+ QYF A+ LK++ LL +LR GI+P G Y+++ I IK+ + P + C G +L +I +C D+ N Sbjct: 9 VLFVLLFV--LSPIYGA--FEYMQLVLQWPTAFCHTTPCKRIPN------NFTIHGLWPD-NVSTTLNYCAAKENFKNIEDDTKKDDLYKRWPDLTTAETYCKQHQNFWRHEYNKHGKCCSESYNREQYFDLAMALKDKFDLLSSLRNHGIIPGRGMKYTVQKINSTIKKITQGYPNLSCT---KGIMELVEIGICFDSMVKN 197
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS11_NICAL (Ribonuclease S-F11 OS=Nicotiana alata PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.339e-21 Identity = 63/184 (34.24%), Postives = 95/184 (51.63%), Query Frame = 3 Query: 171 NFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGIT---FWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASN 713 +F++ VL WP S+C A C +F IHGLWP+ N + NC P + + + + K+W L G T W +++ KHG+C + NQ+ YF AL LK++ LL+ L+T I+P GSSY+ + I DAIK S +P I+C G +LY+I +C +A + Sbjct: 1 DFEYLQLVLTWPASFC-YANHCERIAPN----NFTIHGLWPD-NVKTRLHNCKPKPTYSYFT-GKMLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP-GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADS 176
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNT2_MOUSE (Ribonuclease T2 OS=Mus musculus GN=Rnaset2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 59/170 (34.71%), Postives = 87/170 (51.18%), Query Frame = 3 Query: 201 WPGSYCDTAKSCCYPTTGKPAADFG-IHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGITFWSHEWEKHGTCS---ESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNS--QLYQIYLC 692 WP + C SC + + D+ IHGLWP+ + +C+ + F+ +I DL M+ WP + S N FW HEW KHGTC+ +++ ++ +YF +L+L QI L L+ GI P + Y L KDA+ G P I+C + E G S + QI LC Sbjct: 48 WPPTVCKEVNSC------QDSLDYWTIHGLWPDRAE-----DCNQSWHFNLDEIKDLLRDMKIYWPDVIHRSSNRSQFWKHEWVKHGTCAAQVDALNSEKKYFGKSLDLYKQIDLNSVLQKFGIKPSINYYQLADFKDALTRIYGVVPKIQCLMPEQGESVQTVGQIELC 206
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNT2_HUMAN (Ribonuclease T2 OS=Homo sapiens GN=RNASET2 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 6.053e-20 Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 192 VLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGITFWSHEWEKHGTCS---ESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIEC---NVDESGNSQLYQIYLCV 695 V WP + C+ ++ C P + IHGLWP+ ++G C+ + PF+ +I DL M+ WP + N FW HEWEKHGTC+ +++ +Q +YF +L L ++ L L GI P + Y + KDA+ G P I+C + DE + + QI LC+ Sbjct: 40 VQHWPETVCEKIQNDCRD----PPDYWTIHGLWPDKSEG-----CNRSWPFNLEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQT-IGQIELCL 203
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS2_NICAL (Ribonuclease S-2 OS=Nicotiana alata GN=S-2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 59/201 (29.35%), Postives = 100/201 (49.75%), Query Frame = 3 Query: 120 LIKLFFIQYLSVLCAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGI---TFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASN 713 L +FFI ++ F++ VL WP ++C K C + +F IHGLWP+ N + + CD + P++ ++ + + WP L + + FW E+ KHGTC ++ QYF A+ L+++ LL +LR GI G SY+++++ + IK +G P + C S +L +I +C D + N Sbjct: 6 LTSVFFILLCALSPIYGAFEYMQLVLTWPITFC-RIKHC-----ERTPTNFTIHGLWPD-NHTTMLNYCDRSKPYNMFTDGKKKNDLDERWPDLTKTKFDSLDKQAFWKDEYVKHGTCCSDKFDREQYFDLAMTLRDKFDLLSSLRNHGI-SRGFSYTVQNLNNTIKAITGGFPNLTC----SRLRELKEIGICFDETVKN 194
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS3_PETHY (Ribonuclease S-3 OS=Petunia hybrida GN=S3 PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.125e-19 Identity = 61/204 (29.90%), Postives = 100/204 (49.02%), Query Frame = 3 Query: 108 FSIILIKLFFIQYLSVLCAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGIT---FWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKE-ASGFSPWIECNVDESGNSQLYQIYLCVDTSA 707 F + LI FFI S+ + NFD+F VL WP S+C C + + +F IHGLWP C + + ++ + ++++W + T W HE+ +HG C +++ +Q YF A+ LK+++ LL LRT GI P G+ ++ I+ AIK S P ++C + G +L +I +C +A Sbjct: 2 FRLQLISAFFILLFSLSPVSANFDYFQLVLTWPASFCYPKNKC-----QRRSNNFTIHGLWPEKKRFRLEF-CTGDKYKRFLEEDNIINVLERHWIQMRFDETYANTKQPLWEHEYNRHGICCKNLYDQKAYFLLAMRLKDKLDLLTTLRTHGITP-GTKHTFGEIQKAIKTVTSNNDPDLKCVENIKGVMELNEIGICYTPAA 198
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS2_SOLTU (Ribonuclease S-2 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.693e-19 Identity = 60/201 (29.85%), Postives = 94/201 (46.77%), Query Frame = 3 Query: 120 LIKLFFIQYLSVLCAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGIT---FWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASN 713 L+ F+ + S+ +FD+ VL WP S+C C P +F IHGLWP+ + + + + ++ +W L GI W +++KHGTC NQ QYF A+ LK + LL LRT GI P G+ ++ + I+DAIK + P ++C + G +LY+I +C A + Sbjct: 6 LVSALFVFFFSLSPIYGDFDYMQLVLTWPRSFCYPRGFC----NRIPPNNFTIHGLWPDKKPMRGQLQFCTSDDYIKFTPGSVLDALDHHWIQLKFEREIGIRDQPLWKDQYKKHGTCCLPRYNQLQYFLLAMRLKEKFDLLTTLRTHGITP-GTKHTFKKIQDAIKTVTQEVPDLKCVENIQGVLELYEIGICFTPEADS 201
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNT2_PIG (Ribonuclease T2 OS=Sus scrofa GN=RNASET2 PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 59/174 (33.91%), Postives = 89/174 (51.15%), Query Frame = 3 Query: 192 VLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGN-GITFWSHEWEKHGTCS---ESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGN--SQLYQIYLCV 695 V WP + C+ K+C +P + IHGLWP+ + C+ + PF+ +I L M+ WP + S N + FW HEWEKHGTC+ +++ +Q +YF L+L ++ L L+ GI P S Y + IK A+ G P ++C +SG L QI LC+ Sbjct: 9 VHHWPMTVCNE-KNCEHPPDY-----WTIHGLWPDKS-----GECNRSWPFNPDEIKGLLPDMRLYWPDVLHSSPNHSVHFWRHEWEKHGTCAAQLDALNSQRKYFGKTLDLYKELALNSTLQKLGIKPSISYYQISDIKHALVGVYGVVPKVQCLPPKSGEKVQTLGQIELCL 171
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS6_NICAL (Ribonuclease S-6 OS=Nicotiana alata PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.142e-18 Identity = 58/205 (28.29%), Postives = 101/205 (49.27%), Query Frame = 3 Query: 108 FSIILIKLFFIQYLSVLCAARNFDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYPSNCDPNAPFDQSQISDLRSSMQKNWPTLACPSGNGI---TFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTSASN 713 F++ L +F I ++ F++ VLQWP ++C T P+ +F IHGLWP+ N + + C ++ ++ + WP L + + FW E+ KHGTC + NQ QYF+ A+ LK++ LL +L+ GI+ G Y+++ I + IK + P + C + +L+ + +C D++A N Sbjct: 2 FNLPLTSVFVIFLFALSPIYGAFEYMQLVLQWPTAFCHTTPCKNIPS------NFTIHGLWPD-NVSTTLNFCGKEDDYNIIMDGPEKNGLYVRWPDLIREKADCMKTQNFWRREYIKHGTCCSEIYNQVQYFRLAMALKDKFDLLTSLKNHGII-RGYKYTVQKINNTIKTVTKGYPNLSC----TKGQELWFVGICFDSTAKN 194
BLAST of CX295559 vs. ExPASy Swiss-Prot
Match: RNS2_ANTHI (Ribonuclease S-2 OS=Antirrhinum hispanicum GN=S2 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.491e-18 Identity = 66/209 (31.58%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 99 KRQFSIILIKLFFIQYLSVLCAARN--FDFFYFVLQWPGSYCDTAKSCCYPTTGKPAADFGIHGLWPNYNDGSYP-SNCDPNAPFDQSQISD--LRSSMQKNWPTLACPSGN--GITFWSHEWEKHGTCSESVLNQHQYFQTALNLKNQIHLLQALRTAGIVPDGSSYSLESIKDAIKEASGFSPWIECNVDESGNSQLYQIYLCVDTS 704 K Q S + + I +LS C+ FD+F VLQWP SYC + C P T P+ F IHGLWP+ + S+P SNC + D +I+D L + +WP L G FW +W+KHG C+ + + + YF AL LK + ++L L + P + + AI + +G ++C L ++ +C D S Sbjct: 6 KSQHSHFFLLVGCIVHLSNFCSTTTAQFDYFKLVLQWPNSYCSLKTTHC-PRTRLPS-QFTIHGLWPD--NKSWPLSNCRDTSA-DVLKITDKGLIQDLAVHWPDLTRRQRKVPGQKFWVTQWKKHGACALPMYSFNDYFVKALELKKRNNVLDMLSRKSLTPGDQRVDVSDVNGAITKVTGGIAILKC-----PEGYLTEVIICFDPS 204 The following BLAST results are available for this feature:
BLAST of CX295559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295559 ID=CX295559; Name=CX295559; organism=Citrus clementina; type=EST; length=721bpback to top |