CX295588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DHH1_MAGGR (ATP-dependent RNA helicase DHH1 OS=Magnaporthe grisea GN=DHH1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.175e-28 Identity = 75/184 (40.76%), Postives = 108/184 (58.70%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F +F LK +LL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA FV+ L+ P ++ L+L TRELA Q + +L I V V GG ++ D+L+ + P IVVGTPGRIL LA L FI+DE DK+L S++ ++++ + P D+Q M+FSA Sbjct: 38 FENFGLKRDLLMGIFEAGFEKPSPIQEESIPVALTGRDILARAKNGTGKTAAFVVPALETINPKVSKIQCLILVPTRELAMQTSQVCKTLGKHL-GINVMVTTGGTTLR--DDILRLQDPVHIVVGTPGRILDLAGKNVADLSECPMFIMDEADKLL-SIEFTPVIEQLLQFHPKDRQVMLFSA 217
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 77/186 (41.40%), Postives = 105/186 (56.45%), Query Frame = 2 Query: 131 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 + F LKPELLR I GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I+ GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML S + +IF++ P Q ++ SA Sbjct: 24 TDSFDSMELKPELLRGIYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSA 206
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DHH1_CANAL (ATP-dependent RNA helicase DHH1 OS=Candida albicans GN=DHH1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 73/184 (39.67%), Postives = 111/184 (60.33%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F DF LK ELL I ++GFE PS +Q E IP A+ G D++ +AK+G GKTA F++ LQ +P +V AL+L TRELA Q ++ + V GG +++ D+++ P I+VGTPGR+L LA K + L F++DE DKML S + + +++I + P ++Q+++FSA Sbjct: 32 FEDFNLKRELLMGIFEAGFEKPSPIQEESIPMALAGRDILARAKNGTGKTASFIIPCLQLVKPKLNKVQALILVPTRELALQTSQVVRTLGKHV-GTQCMVTTGGTSLR--DDIVRLHDPVHILVGTPGRVLDLAARKVVDLSECPLFVMDEADKML-SREFKGIIEQILEFFPPNRQALLFSA 211
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DHH1_BOTFB (ATP-dependent RNA helicase dhh1 OS=Botryotinia fuckeliana (strain B05.10) GN=dhh1 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.841e-28 Identity = 74/184 (40.22%), Postives = 107/184 (58.15%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECP-QIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F DF +K ELL I + G+E PS +Q E IP A+ G D++ +AK+G GKTA FV+ L++ P +V L+L TRELA Q + +L I V V GG ++ D+L+ + P I+VGTPGRIL LA L F++DE DK+L S + ++++ + P D+Q M+FSA Sbjct: 49 FEDFSIKRELLMGIFEMGYEKPSPIQEEAIPVALTGRDILARAKNGTGKTAAFVIPALERINPKNTKVQCLILVPTRELALQTSQVCKTLGQHL-GINVMVTTGGTTLR--DDILRLQEPVHIIVGTPGRILDLAGKNVADLSECNMFVMDEADKLL-SPEFTIVIEQLLQFHPKDRQIMLFSA 228
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 75/178 (42.13%), Postives = 103/178 (57.87%), Query Frame = 2 Query: 155 LKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 LKPELLR + GFE PS +Q I I G DVI QA+SG GKTA F +S LQ+ +PN AL+L TRELA QI ++ +I+ GG N++ L+ E PQ+VVGTPGR+ + + + L N++ FILDE D+ML S + +IF++ P Q ++ SA Sbjct: 32 LKPELLRGVYAYGFERPSAIQQRAILPIIKGNDVIAQAQSGTGKTATFSISALQKLDPNVKGCQALILAPTRELAQQIQKVVVAIGDFM-NIECHACIGGTNVREDMKALQ-EGPQVVVGTPGRVQDMIQRRVLRTDNLKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSA 206
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 73/183 (39.89%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q+ +FSA Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSA 188
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DEAD_HAEIN (Cold-shock DEAD box protein A homolog OS=Haemophilus influenzae GN=deaD PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 73/183 (39.89%), Postives = 99/183 (54.10%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F D L +L+A+ D GFE PS +Q CIP + G DV+ A++G GKTA F L L Q +P+ LV+ TRELA Q+ E F Y ++ YGG I LK + Q+VVGTPGRIL R L+L +R +LDE D+ML + DV+ + P + Q+ +FSA Sbjct: 7 FNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALK-QGAQVVVGTPGRILDHIRRGTLNLSELRFIVLDEADEMLR-MGFIDDVETVMAELPENHQTALFSA 187
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 73/183 (39.89%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q+ +FSA Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSA 188
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 73/183 (39.89%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q+ +FSA Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSA 188
BLAST of CX295588 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 124.405 bits (311), Expect = 6.329e-28 Identity = 73/183 (39.89%), Postives = 98/183 (53.55%), Query Frame = 2 Query: 140 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQSMMFSA 688 F D LK +L A+ D G+E PS +Q ECIP + G DV+ A++G GKTA F L LQ +P LVL TRELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q+ +FSA Sbjct: 8 FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSA 188 The following BLAST results are available for this feature:
BLAST of CX295588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295588 ID=CX295588; Name=CX295588; organism=Citrus clementina; type=EST; length=738bpback to top |