CX295606

Overview
NameCX295606
Unique NameCX295606
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length726
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: PR1_PHAVU (Pathogenesis-related protein 1 OS=Phaseolus vulgaris PE=1 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 5.743e-26
Identity = 61/156 (39.10%), Postives = 87/156 (55.77%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKAL-NDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNP 512
            MGV   E +  S VAP+ L+KA+  D     PK  P + KS++I++G+GG GTIK ++F + G  K    +I+++DE NL   Y+   G  + +  +K  +D K+ D  NGGS+ K     H+  D   NE   K  + K   LFK VEAYLL NP
Sbjct:    1 MGVFTFEDQTTSPVAPATLYKAVAKDADTIFPKALPDSFKSVEIVEGNGGPGTIKKISFVEDGETKFVLHKIESIDEANLGYSYSIVGGVALPETAEKITFDSKLSDGPNGGSLIKLSITYHSKGDAPPNEDELKAGKAKSDSLFKAVEAYLLANP 156          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1J_BETVE (Major pollen allergen Bet v 1-J OS=Betula verrucosa GN=BETV1J PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + D  N  PK+APQ I S++ ++G+GG GTIK ++F +G  +K  K R+D +D  N    Y+  EG  +    +K   ++KI+ + NGGSI K   + H   D  V     K S+E G  L + VE+YLL + + Y
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1C_BETVE (Major pollen allergen Bet v 1-C OS=Betula verrucosa GN=BETV1C PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.850e-25
Identity = 58/159 (36.48%), Postives = 91/159 (57.23%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + +    +PK+APQ I S++ ++G+GG GTIK + F +G  +K  K+R+D +D  N    Y+  EG  +    +K   ++KI+ + +GGSI K   + H   D+ +   H K  +EKG  L + VE+YLL + + Y
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDQEMKAEHMKAIKEKGEALLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: ABR18_PEA (ABA-responsive protein ABR18 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.723e-25
Identity = 57/157 (36.31%), Postives = 91/157 (57.96%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKAL-NDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPN 515
            MGV   E +  S V P++LFKA+ +D    +PK+   +IK+++IL+G+GG GT+K L F +GG       +++A+D+      Y+   G GI  + +K  ++ K+ +  NGGS+ K + + H   D    E   +E + KG  LFK +EAY+L NPN
Sbjct:    1 MGVFTYENDTTSTVPPAKLFKAVVHDADLIVPKVV-DSIKTVEILEGNGGPGTVKKLTFVEGGQTLYVLHKVEAIDDAKFEYNYSIVGGVGISDIVEKISFEAKLFEGPNGGSVGKMIVKYHTKGDAKPIEKEVEEGKAKGDALFKAIEAYVLANPN 156          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: MPAG1_ALNGL (Major pollen allergen Aln g 1 OS=Alnus glutinosa PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E PS +  +RLFKA + D    LPK+AP+ + S++ ++G+GG GTIK + F +G  +K  K+R+D +D  N    ++  EG  +    +K   ++KI+ + +GGSI K   + H   D  +N    K  +EK   L K VE+YLL + + Y
Sbjct:    1 MGVFNYEAETPSVIPAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDRVNFKYSFSVIEGGAVGDALEKVCNEIKIVAAPDGGSILKISNKFHTKGDHEINAEQIKIEKEKAVGLLKAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1K_BETVE (Major pollen allergen Bet v 1-K OS=Betula verrucosa GN=BETV1K PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + +    +PK+APQ I S++ ++G+GG GTIK + F +G  +K  K+R+D +D  N    Y+  EG  +    +K   ++KI+ + +GGSI K   + H   D  +   H K  +EKG  L + VE+YLL + + Y
Sbjct:    1 MGVFNYESETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1F_BETVE (Major pollen allergen Bet v 1-F/I OS=Betula verrucosa GN=BETV1F PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + D  N  PK+APQ I S++ ++G+GG GTIK ++F +G  +K  K R+D +D  N    Y+  EG  +    +K   ++KI+ + NGGSI K   + H   D  V     K S+E G  L + VE+YLL + + Y
Sbjct:    1 MGVFNYEIEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1A_BETVE (Major pollen allergen Bet v 1-A OS=Betula verrucosa GN=BETVIA PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 4.862e-25
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + D  N  PK+APQ I S++ ++G+GG GTIK ++F +G  +K  K R+D +D  N    Y+  EG  I    +K   ++KI+ + +GGSI K   + H   D  V     K S+E G  L + VE+YLL + + Y
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGFPFKYVKDRVDEVDHTNFKYNYSVIEGGPIGDTLEKISNEIKIVATPDGGSILKISNKYHTKGDHEVKAEQVKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1E_BETVE (Major pollen allergen Bet v 1-E OS=Betula verrucosa GN=BETV1E PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 61/159 (38.36%), Postives = 89/159 (55.97%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + D  N  PK+APQ I S++ ++G+GG GTIK ++F +G  +K  K R+D +D  N    Y+  EG  +    +K   ++KI+ + NGGSI K   + H   D  V     K S+E G  L + VE+YLL + + Y
Sbjct:    1 MGVFNYETEATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGGPGTIKKISFPEGIPFKYVKGRVDEVDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVATPNGGSILKINNKYHTKGDHEVKAEQIKASKEMGETLLRAVESYLLAHSDAY 159          
BLAST of CX295606 vs. ExPASy Swiss-Prot
Match: BEV1B_BETVE (Major pollen allergen Bet v 1-B OS=Betula verrucosa GN=BETV1B PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 58/159 (36.48%), Postives = 90/159 (56.60%), Query Frame = 3
Query:   48 MGVIRVEKEVPSAVAPSRLFKA-LNDTHNFLPKIAPQTIKSIDILQGDGGAGTIKLLNFADGGNYKQTKQRIDALDEDNLTMKYTTYEGDGILKMTDKSVYDVKIMDSGNGGSICKFVAEVHANDDKLVNEGHAKESEEKGSELFKLVEAYLLGNPNLY 521
            MGV   E E  S +  +RLFKA + +    +PK+APQ I S++ ++G+GG GTIK + F +G  +K  K+R+D +D  N    Y+  EG  +    +K   ++KI+ + +GGSI K   + H   D  +   H K  +EKG  L + VE+YLL + + Y
Sbjct:    1 MGVFNYETETTSVIPAARLFKAFILEGDTLIPKVAPQAISSVENIEGNGGPGTIKKITFPEGSPFKYVKERVDEVDHANFKYSYSMIEGGALGDTLEKICNEIKIVATPDGGSILKISNKYHTKGDHEMKAEHMKAIKEKGEALLRAVESYLLAHSDAY 159          
The following BLAST results are available for this feature:
BLAST of CX295606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
PR1_PHAVU5.743e-2639.10Pathogenesis-related protein 1 OS=Phaseolus vulgar... [more]
BEV1J_BETVE2.850e-2538.36Major pollen allergen Bet v 1-J OS=Betula verrucos... [more]
BEV1C_BETVE2.850e-2536.48Major pollen allergen Bet v 1-C OS=Betula verrucos... [more]
ABR18_PEA3.723e-2536.31ABA-responsive protein ABR18 OS=Pisum sativum PE=2... [more]
MPAG1_ALNGL4.862e-2536.48Major pollen allergen Aln g 1 OS=Alnus glutinosa P... [more]
BEV1K_BETVE4.862e-2536.48Major pollen allergen Bet v 1-K OS=Betula verrucos... [more]
BEV1F_BETVE4.862e-2538.36Major pollen allergen Bet v 1-F/I OS=Betula verruc... [more]
BEV1A_BETVE4.862e-2538.36Major pollen allergen Bet v 1-A OS=Betula verrucos... [more]
BEV1E_BETVE6.350e-2538.36Major pollen allergen Bet v 1-E OS=Betula verrucos... [more]
BEV1B_BETVE6.350e-2536.48Major pollen allergen Bet v 1-B OS=Betula verrucos... [more]

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Properties
Property NameValue
Genbank descriptionC05074A03SK DroRLeaf1 Citrus clementina cDNA clone C05074A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295606 ID=CX295606; Name=CX295606; organism=Citrus clementina; type=EST; length=726bp
GAGGATTGACATCTCTCTTTTCTCTAATTAAGCAATAGATATTTAACATG
GGTGTCATTCGCGTTGAGAAAGAGGTGCCATCGGCTGTTGCACCATCAAG
ATTGTTCAAGGCTTTAAATGACACTCACAATTTTTTGCCAAAGATCGCGC
CTCAAACAATTAAGAGCATCGATATTCTTCAAGGAGATGGAGGTGCTGGC
ACTATCAAGCTGTTGAACTTTGCTGATGGTGGTAATTACAAGCAGACGAA
GCAAAGAATTGATGCACTTGACGAGGACAATTTGACAATGAAGTACACTA
CGTATGAAGGAGATGGGATTTTGAAAATGACGGACAAAAGCGTGTACGAT
GTTAAGATCATGGATTCTGGCAATGGAGGAAGCATCTGCAAGTTTGTTGC
GGAGGTCCATGCAAATGACGATAAACTGGTCAACGAAGGGCACGCAAAGG
AATCCGAAGAAAAAGGATCGGAATTGTTCAAGCTCGTGGAAGCCTATCTC
TTGGGTAATCCTAATCTCTATGCTTAAATCAATCATCCATATGCATTGGC
TTTGCCAATTGCGAAATTTCCAGCTAGCTAACTAAATAAGGCTGGTGCCA
TTGTACGTAATTAAGCTTTTGAAGCTGAATGTAAATACACGCGTATGTAC
TTAGTGTGTTCGTTAAATAAATGTCCAATCTGCTGGACATATGTGAGATA
ATATAGATCATGTGTGGTCAGTATGC
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