CX295610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BURCC (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cenocepacia (strain MC0-3) GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL TI+ P ++ L + L+ LA ELRA +++SVSKTGGHLS+NLG VELT+ALH VFNTP+D+I Sbjct: 4 LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNTPNDRI 68
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BURCA (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia cenocepacia (strain AU 1054) GN=dxs PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL TI+ P ++ L + L+ LA ELRA +++SVSKTGGHLS+NLG VELT+ALH VFNTP+D+I Sbjct: 4 LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNTPNDRI 68
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BURA4 (1-deoxy-D-xylulose-5-phosphate synthase OS=Burkholderia ambifaria (strain MC40-6) GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 40/65 (61.54%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 297 LLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 LL TI+ P ++ L + L+ LA ELRA +++SVSKTGGHLS+NLG VELT+ALH VFNTP+D+I Sbjct: 4 LLKTIDDPADLRRLDRRQLQPLADELRAFVLDSVSKTGGHLSSNLGTVELTIALHYVFNTPNDRI 68
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 3 Query: 291 TPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 TPLLDT+ ++ L +E L QLA ELRA+ +++VS TGGHL A LGVVELT+ALH VFNTP D++ Sbjct: 6 TPLLDTVRDASDVRRLPEEKLSQLADELRAETISAVSVTGGHLGAGLGVVELTVALHHVFNTPHDRL 72
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS2_RHOS4 (1-deoxy-D-xylulose-5-phosphate synthase 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=dxs2 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 3 Query: 279 EKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 ++P TP LD + P+ +K L+ +L LA ELRA+ +++VS TGGHL A LGVVELT+ALH +F+ P DKI Sbjct: 3 DRPCTPTLDRVTLPVDIKGLTDRELRSLADELRAETISAVSVTGGHLGAGLGVVELTVALHAIFDAPRDKI 73
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_PSEPF (1-deoxy-D-xylulose-5-phosphate synthase OS=Pseudomonas fluorescens (strain Pf0-1) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.551e-15 Identity = 37/75 (49.33%), Postives = 54/75 (72.00%), Query Frame = 3 Query: 267 DFSEEKPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 + ++P TPLLD N P ++ L + +LE LA ELR +++ +V +TGGH A LGV+ELT+ALH VF+TPDD++ Sbjct: 7 EIPRKRPTTPLLDRANTPDGLRRLGEAELETLADELRLELLYTVGQTGGHFGAGLGVIELTIALHYVFDTPDDRL 81
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_CELJU (1-deoxy-D-xylulose-5-phosphate synthase OS=Cellvibrio japonicus (strain Ueda107) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.551e-15 Identity = 38/70 (54.29%), Postives = 55/70 (78.57%), Query Frame = 3 Query: 282 KPPTPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 +P TPLLD+I+ P ++ LS++ L QLA ELRA ++ +V +TGGH A LGVVELT+ALH V++TP+D++ Sbjct: 9 RPATPLLDSIDSPAELRALSEKQLPQLADELRAFLLYTVGQTGGHFGAGLGVVELTIALHYVYDTPEDRL 78
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_BORPD (1-deoxy-D-xylulose-5-phosphate synthase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dxs PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.551e-15 Identity = 40/67 (59.70%), Postives = 52/67 (77.61%), Query Frame = 3 Query: 291 TPLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 T LLD I+ P ++ L + +L+ LA ELR ++ SVS+TGGHLS+NLG VELTLALHRVF+TP D+I Sbjct: 3 TELLDRIHSPDDVRQLDRRELKALAEELRGFVLESVSRTGGHLSSNLGTVELTLALHRVFDTPHDRI 69
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_VEREI (1-deoxy-D-xylulose-5-phosphate synthase OS=Verminephrobacter eiseniae (strain EF01-2) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15 Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 3 Query: 294 PLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 PLL+TI+ P ++ L++ L+ LAAELR ++ SVS+TGGHLS+NLG VELT+ALH VF TP D++ Sbjct: 7 PLLETIDDPAQLRQLARAQLKVLAAELRGFVLESVSRTGGHLSSNLGTVELTVALHHVFQTPHDRL 72
BLAST of CX295610 vs. ExPASy Swiss-Prot
Match: DXS_DIAST (1-deoxy-D-xylulose-5-phosphate synthase OS=Diaphorobacter sp. (strain TPSY) GN=dxs PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.025e-15 Identity = 38/66 (57.58%), Postives = 52/66 (78.79%), Query Frame = 3 Query: 294 PLLDTINYPIHMKNLSKEDLEQLAAELRADIVNSVSKTGGHLSANLGVVELTLALHRVFNTPDDKI 491 PLL+ +N P ++ L + +L+ LA ELRA ++ SVSKTGGHLS+NLG VELT+ALH VF+TP D++ Sbjct: 7 PLLERVNDPADLRRLPRAELKALATELRAFVLESVSKTGGHLSSNLGTVELTVALHAVFDTPRDRL 72 The following BLAST results are available for this feature:
BLAST of CX295610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 303
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295610 ID=CX295610; Name=CX295610; organism=Citrus clementina; type=EST; length=493bpback to top |