CX295615
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RICPR (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia prowazekii GN=petA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.766e-24 Identity = 52/95 (54.74%), Postives = 71/95 (74.74%), Query Frame = 1 Query: 394 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDF 672 S + S DVLAL+S+EVDLS+I G TVTVKW+GKP+FI RT ++I A +V ++ L DP+ D VRVK + WLV +G+CTHLGC+PL + G++ Sbjct: 40 SFNPSADVLALSSIEVDLSNIAIGQTVTVKWQGKPIFITNRTHDEIAAARAVKMSELIDPERDEVRVKAGHDNWLVTIGICTHLGCVPLSHKGEY 134
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RICFE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia felis GN=petA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24 Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 1 Query: 394 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDF 672 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+PL N G++ Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPETDEARVKAGHDNWLVTIGICTHLGCVPLANQGEY 134
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RICCN (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rickettsia conorii GN=petA PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.718e-24 Identity = 53/95 (55.79%), Postives = 70/95 (73.68%), Query Frame = 1 Query: 394 SMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDF 672 S++ S DVLAL+S+EVDLS+I G TVTVKW+GKPVFI RT + I A +V ++ L DP+ D RVK + WLV +G+CTHLGC+PL N G++ Sbjct: 40 SLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADQARVKAGHDNWLVTIGICTHLGCVPLANQGEY 134
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_PARDE (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Paracoccus denitrificans GN=petA PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23 Identity = 64/148 (43.24%), Postives = 83/148 (56.08%), Query Frame = 1 Query: 271 HNHERYPPGDASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRD-----------PQEDSVRVKNP--EWLVVVGVCTHLGCIPL-PNAGDF 672 H E A++R F Y+ G V A ++ M+ S DV ALAS++VD+S +E GT +TVKW GKPVFIRRRTE++IQ VD+ L D P D R + EWLV++GVCTHLGC+P+ AGDF Sbjct: 3 HADEHAGDHGATRRDFLYYATAGAGTVAAGAAAWTLVN---QMNPSADVQALASIQVDVSGVETGTQLTVKWLGKPVFIRRRTEDEIQAGREVDLGQLIDRSAQNSNKPDAPATDENRTMDEAGEWLVMIGVCTHLGCVPIGDGAGDF 147
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RHOCA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter capsulatus GN=petA PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.532e-22 Identity = 54/111 (48.65%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 397 MSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVR------------------VKNPEWLVVVGVCTHLGCIPL-PNAGDF 672 M+AS DV A+AS+ VD+S++E GT +TVKWRGKPVFIRRR E+DI+LA SV + +LRD ++ EWLV++GVCTHLGC+P+ +GDF Sbjct: 38 MNASADVKAMASIFVDVSAVEVGTQLTVKWRGKPVFIRRRDEKDIELARSVPLGALRDTSAENANKPGAEATDENRTLPAFDGTNTGEWLVMLGVCTHLGCVPMGDKSGDF 148
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_BRAJA (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Bradyrhizobium japonicum GN=petA PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.423e-20 Identity = 48/99 (48.48%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 385 FVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDF 672 F+ M+ +A A +EVDLS I G + V WRGKP++I RT++ I A +V+VASL DPQ D RVK + +WLVV+G+CTHLGCIP+ + G++ Sbjct: 35 FISQMNPDASTIAAGAPIEVDLSPIAEGQDIKVFWRGKPIYISHRTKKQIDEARAVNVASLPDPQSDEARVKSGHEQWLVVIGICTHLGCIPIAHEGNY 133
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RHOVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodopseudomonas viridis GN=petA PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-20 Identity = 54/128 (42.19%), Postives = 75/128 (58.59%), Query Frame = 1 Query: 298 DASKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRVK--NPEWLVVVGVCTHLGCIPLPNAGDF 672 +A++R F Y V A+ + + F+ M+ +A A +++D+S + G V V WRGKP+FIR RT ++IQ + DV +L DPQ DS RVK EWLVV CTHLGCIPL + GD+ Sbjct: 8 EATRRDFLYVATAA---VGAAGVAAVAWPFITQMNPDAATIAAGAPIDIDISPVTEGQIVRVFWRGKPIFIRHRTAKEIQSEEAADVGALIDPQPDSARVKPGKAEWLVVYASCTHLGCIPLGHQGDW 132
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_RHOSH (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Rhodobacter sphaeroides GN=petA PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.208e-20 Identity = 56/138 (40.58%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 304 SKRAFAYFILTGGRFVYASLIRLLILKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVDVASLRDPQEDSVRV--------------KNPEWLVVVGVCTHLGCIPLPN-AGDF 672 ++R F Y+ G V + + M+ S DV ALAS+ VD+SS+EPG +TVK+ GKP+FIRRRTE DI+L SV + L D + + + EWLV+ GVCTHLGC+P+ +GDF Sbjct: 10 TRRDFLYYATAGAGAVATGAA---VWPLINQMNPSADVQALASIFVDVSSVEPGVQLTVKFLGKPIFIRRRTEADIELGRSVQLGQLVDTNARNANIDAGAEATDQNRTLDEAGEWLVMWGVCTHLGCVPIGGVSGDF 144
BLAST of CX295615 vs. ExPASy Swiss-Prot
Match: UCRI_CHRVI (Ubiquinol-cytochrome c reductase iron-sulfur subunit OS=Chromatium vinosum GN=petA PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.685e-11 Identity = 39/102 (38.24%), Postives = 56/102 (54.90%), Query Frame = 1 Query: 376 ILKFVLSMSASKDVLAL-ASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEEDIQLANSVD---------VASLRDPQEDSVRVKNPEWLVVVGVCTHLGCIP 651 ++ FV SM+ S A A +E D+S +EPG + VKWRG PV++ R+ E + +S D V D ++ R PE+LV +G+CTHLGC P Sbjct: 40 LVPFVASMNPSARARAAGAPVEADISKLEPGALLRVKWRGMPVWVVHRSSEMLAALSSNDPKLVDPTSEVPQQPDYCKNPTRSIKPEYLVAIGICTHLGCSP 141 The following BLAST results are available for this feature:
BLAST of CX295615 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295615 ID=CX295615; Name=CX295615; organism=Citrus clementina; type=EST; length=673bpback to top |