CX295620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12 Identity = 44/121 (36.36%), Postives = 57/121 (47.11%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD A+VIDNG+G K GFAG+ P + P++V + GVM + D ++GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 1 MDGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT_PICPG (Actin OS=Pichia pastoris (strain GS115) GN=ACT1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 45/121 (37.19%), Postives = 57/121 (47.11%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD A+VIDNG+G K G+AG+ P + P+VV + GVM + D F+GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 1 MDGEDVAALVIDNGSGMCKAGYAGDDAPHTVFPSVVG------------------RPRHQGVMVGMGQKDSFVGDEAQSKR---GILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRLAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT_CYAME (Actin OS=Cyanidioschyzon merolae PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 42/111 (37.84%), Postives = 56/111 (50.45%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADLDFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+VIDNG+G K GFAG+ P + P++V R +A + M D ++GDEA +K +L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVIDNGSGMVKAGFAGDDAPRAVFPSIVG---------RPRHQAVMVG------MGQKDSYVGDEAQSKR---GILSLKYPIEHGIVTNWDDMEKIWYHTFYNELRISPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFX (Actin-1 OS=Plasmodium falciparum (isolate HB3) PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 42/114 (36.84%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+V+DNG+G K G AG+ P + P++V + N G+M + D F+GDEA TK L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVVDNGSGNVKAGVAGDDAPRSVFPSIVGRPK------------------NPGIMVGMEEKDAFVGDEAQTKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT1_PLAFO (Actin-1 OS=Plasmodium falciparum (isolate NF54) PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 42/114 (36.84%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+V+DNG+G K G AG+ P + P++V + N G+M + D F+GDEA TK L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVVDNGSGNVKAGVAGDDAPRSVFPSIVGRPK------------------NPGIMVGMEEKDAFVGDEAQTKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT1_PLAF7 (Actin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PFL2215w PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12 Identity = 42/114 (36.84%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+V+DNG+G K G AG+ P + P++V + N G+M + D F+GDEA TK L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVVDNGSGNVKAGVAGDDAPRSVFPSIVGRPK------------------NPGIMVGMEEKDAFVGDEAQTKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRAAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT_ASHGO (Actin OS=Ashbya gossypii GN=ACT1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 43/121 (35.54%), Postives = 57/121 (47.11%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD A+VIDNG+G K GFAG+ P + P++V + G+M + D ++GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 1 MDSGEVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHQGIMVGMGQKDSYVGDEAQSKR---GILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACT_CANDC (Actin OS=Candida dubliniensis (strain CD36 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=ACT1 PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 43/121 (35.54%), Postives = 57/121 (47.11%), Query Frame = 1 Query: 334 MDPTSRPAVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 MD A+VIDNG+G K GFAG+ P + P++V + G+M + D ++GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 1 MDGEEVAALVIDNGSGMCKAGFAGDDAPRAVFPSLVG------------------RPRHQGIMVGMGQKDSYVGDEAQSKR---GILTLRYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACTD_STRPU (Actin, cytoskeletal 2B OS=Strongylocentrotus purpuratus GN=CYIIB PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 42/114 (36.84%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+VIDNG+G K GFAG+ P + P++V + GVM + D ++GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVIDNGSGMVKAGFAGDDAPRAVFPSIVG------------------RPRHQGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100
BLAST of CX295620 vs. ExPASy Swiss-Prot
Match: ACTA_PHYPO (Actin, plasmodial isoform OS=Physarum polycephalum GN=ARDA PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.314e-11 Identity = 42/114 (36.84%), Postives = 55/114 (48.25%), Query Frame = 1 Query: 355 AVVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSRSSSKANWLAQYNAGVMADL---DFFIGDEAVTKSRSSSTYNLSYPIRHGQVDNWDAMERYWQQCIFNYLRCDPE 687 A+VIDNG+G K GFAG+ P + P++V + GVM + D ++GDEA +K L YPI HG V NWD ME+ W +N LR PE Sbjct: 8 ALVIDNGSGMCKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQKDSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 100 The following BLAST results are available for this feature:
BLAST of CX295620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 280
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295620 ID=CX295620; Name=CX295620; organism=Citrus clementina; type=EST; length=704bpback to top |