CX295628

Overview
NameCX295628
Unique NameCX295628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.199e-20
Identity = 51/130 (39.23%), Postives = 78/130 (60.00%), Query Frame = 1
Query:  133 LPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHL 516
            +P G+RF PTDEEL+ +YL +KV       + I ++D+ +S P  LP    M EK+ YFF+    +       +   A  +GYWK  GK+R+I +S TK ++G++KTL+F +G+     K+ WVMH+Y L
Sbjct:   20 MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKEWYFFT--LRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRL 147          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.076e-19
Identity = 57/136 (41.91%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  139 IGYRFRPTDEELVVHYLKRKVFGLP-LPASIIPELDVFQSHPL-GLPG----DMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILAS-GTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAI 525
            IGYRF PT EE++ HYLK K+ G   L    I E+++    P   LP       ++ + YFFS I  E    N  K K   GSG+WKP G +R+I    G   V+GI+KTL++ EGK  H  +T WVMH+YH+  +
Sbjct:    6 IGYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPI--EYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHITCL 139          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC12_ARATH (NAC domain-containing protein 12 OS=Arabidopsis thaliana GN=NAC012 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.527e-18
Identity = 55/180 (30.56%), Postives = 96/180 (53.33%), Query Frame = 1
Query:  106 NFVVNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP-----GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGD---WVVYRIFQRKKKPK 621
            N  +NG  K+P G+RF PT+EEL+ +YL++KV    +   +I E+D+ +  P  +      G   +   YFFS+   +       +   A  +G+WK  G+++ I+ S  ++ +G+RKTL+F +G+  H  K+ W+MH+Y L     +      V +  +  +   WVV R+F++K   K
Sbjct:    7 NLSINGQSKVPPGFRFHPTEEELLHYYLRKKVNSQKIDLDVIREVDLNKLEPWDIQEECRIGSTPQNDWYFFSH--KDKKYPTGTRTNRATVAGFWKATGRDK-IICSCVRR-IGLRKTLVFYKGRAPHGQKSDWIMHEYRLDDTPMSNGYADVVTEDPMSYNEEGWVVCRVFRKKNYQK 182          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC22_ARATH (NAC domain-containing protein 21/22 OS=Arabidopsis thaliana GN=NAC021 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.442e-18
Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  130 KLPIGYRFRPTDEELVVHYL-KRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAI--ATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSNNL 651
            KLP G+RF P D+ELV  YL +R +     P  ++ ++D+ +  P  +P    +  K  YF+S  + +   A   +   A  +GYWK  GK+R IL  G  ++VG+RKTL+F +G+     KT WVMH++ L       N +L+ P        DWV+ R+F +  +    GV+  +N+
Sbjct:   18 KLPPGFRFHPKDDELVCDYLMRRSLHNNHRPPLVLIQVDLNKCEPWDIPKMACVGGKDWYFYS--QRDRKYATGLRTNRATATGYWKATGKDRTILRKG--KLVGMRKTLVFYQGRAPRGRKTDWVMHEFRLQGSHHPPNHSLSSPK------EDWVLCRVFHKNTE----GVICRDNM 182          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC76_ORYSJ (NAC domain-containing protein 76 OS=Oryza sativa subsp. japonica GN=NAC76 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.802e-18
Identity = 54/168 (32.14%), Postives = 88/168 (52.38%), Query Frame = 1
Query:  121 GGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP-----GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRK 609
            G L +P G+RF PTDEEL+ +YL++KV    +   +I E+D+ +  P  L      G   + + YFFS+   +       +   A  +G+WK  G+++ I  +   + +G+RKTL+F  G+  H  KT W+MH+Y L     N ++ +          WVV R+F +K
Sbjct:    6 GALSVPPGFRFHPTDEELLYYYLRKKVAYEAIDLDVIREIDLNKLEPWDLKDRCRIGTGPQNEWYFFSH--KDKKYPTGTRTNRATTAGFWKATGRDKAIFLANACR-IGMRKTLVFYVGRAPHGKKTDWIMHEYRL--DQDNVDVQE--------DGWVVCRVFMKK 160          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC42_ARATH (NAC domain-containing protein 42 OS=Arabidopsis thaliana GN=NAC042 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17
Identity = 52/170 (30.59%), Postives = 88/170 (51.76%), Query Frame = 1
Query:  142 GYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP--GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKRGVVSSN 645
            G+RF PTDEEL+ +YL+RKV    +   +I ++D+++  P  LP    + EK+ YFF          N  +     GSG+WK  G ++ + ++     VG++K+L++  G  G  TKT W+MH++ L    + T    P  +  +   W + RIF+R    +   ++  N
Sbjct:   21 GFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFF--CMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYSN--LDCVGLKKSLVYYLGSAGKGTKTDWMMHEFRL---PSTTKTDSPAQQAEV---WTLCRIFKRVTSQRNPTILPPN 180          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC7_ARATH (NAC domain-containing protein 7 OS=Arabidopsis thaliana GN=NAC007 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17
Identity = 51/176 (28.98%), Postives = 89/176 (50.57%), Query Frame = 1
Query:  115 VNGGLKLPIGYRFRPTDEELVVHYLKRKVFGLPLPASIIPELDVFQSHPLGLP-----GDMKEKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGDWVVYRIFQRKKKPKKR 627
            +N    +P G+RF PTDEELV +YL++KV    +    I ++D+++  P  L      G  ++   YFFS+   +       +   A  +G+WK  G+++ I       ++G+RKTL+F +G+  +  K+ W+MH+Y L      T   +          WVV R+F+++    +R
Sbjct:    1 MNSFSHVPPGFRFHPTDEELVDYYLRKKVASKRIEIDFIKDIDLYKIEPWDLQELCKIGHEEQSDWYFFSH--KDKKYPTGTRTNRATKAGFWKATGRDKAIYL--RHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEE---------GWVVCRVFKKRLAAVRR 163          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC69_ARATH (NAC domain-containing protein 69 OS=Arabidopsis thaliana GN=NAC69 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16
Identity = 52/135 (38.52%), Postives = 70/135 (51.85%), Query Frame = 1
Query:  139 IGYRFRPTDEELVVHYLKRKVFGLP-LPASIIPELDVFQSHPLGLPGDMKEKKR----YFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILAS-GTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAI 525
            +GYRF PT EEL+ HYLK K+ G   L    I E+++    P+ LP   K K      YFF     E   A     K    SGYWK  G +R+I    G +  +GI+KTL++ EG+      T WVMH+YH+  +
Sbjct:    6 VGYRFYPTGEELINHYLKNKILGKTWLVDEAISEINICSYDPIYLPSLSKIKSDDPVWYFFCP--KEYTSAKKKVTKRTTSSGYWKATGVDRKIKDKRGNRGEIGIKKTLVYYEGRVPKGVWTPWVMHEYHITCL 138          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC90_ARATH (NAC domain-containing protein 90 OS=Arabidopsis thaliana GN=NAC090 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 50/144 (34.72%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  130 KLPIGYRFRPTDEELVVHYLKRKVFGLPLPAS--IIPELDVFQSHPLGLPGDMK-----EKKRYFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILASGTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTN 540
            ++ IG+RF PT+EELV  YL+ ++ G    +   +IP LDVF+  P  LP         + +++FF   R E   A  G+     GSGYWK  G    + +   K ++G +KT++F  GK     KT+W M++YH V    N +
Sbjct:    4 EVTIGFRFYPTEEELVSFYLRNQLEGRSDDSMHRVIPVLDVFEVEPSHLPNVAGVRCRGDAEQWFFFVPRQERE-ARGGRPSRTTGSGYWKATGSPGPVFSKDNK-MIGAKKTMVFYTGKAPTGRKTKWKMNEYHAVDETVNAS 145          
BLAST of CX295628 vs. ExPASy Swiss-Prot
Match: NAC4_ARATH (NAC domain-containing protein 4 OS=Arabidopsis thaliana GN=NAC004 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.024e-14
Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 1
Query:  136 PIGYRFRPTDEELVVHYLKRKVFGLPLP--ASIIPELDVFQSHPLGLPGDMKEKKR----YFFSNIRNESAIANDGKCKIAAGSGYWKPVGKNRQILAS-GTKQVVGIRKTLIFCEGKRGHETKTQWVMHQYHLVAIATNTNLTQPVFKMVIIGD 579
            P+G+RFRP DEE+V HYL+ K           +I  +D+    P  LP     K R    YFFS    E       + +    SG+WK  GK   ++   G ++ +G ++ L+F   K    +KT WVMH+YH  ++  N  +T  V K+   G+
Sbjct:    4 PVGFRFRPNDEEIVDHYLRPKNLDSDTSHVDEVISTVDICSFEPWDLPSKSMIKSRDGVWYFFS--VKEMKYNRGDQQRRRTNSGFWKKTGKTMTVMRKRGNREKIGEKRVLVF---KNRDGSKTDWVMHEYHATSLFPNQMMTYTVCKVEFKGE 153          
The following BLAST results are available for this feature:
BLAST of CX295628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
NAC54_ARATH6.199e-2039.23Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thal... [more]
NAC68_ARATH3.076e-1941.91NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC12_ARATH1.527e-1830.56NAC domain-containing protein 12 OS=Arabidopsis th... [more]
NAC22_ARATH4.442e-1833.52NAC domain-containing protein 21/22 OS=Arabidopsis... [more]
NAC76_ORYSJ5.802e-1832.14NAC domain-containing protein 76 OS=Oryza sativa s... [more]
NAC42_ARATH2.205e-1730.59NAC domain-containing protein 42 OS=Arabidopsis th... [more]
NAC7_ARATH6.415e-1728.98NAC domain-containing protein 7 OS=Arabidopsis tha... [more]
NAC69_ARATH3.184e-1638.52NAC domain-containing protein 69 OS=Arabidopsis th... [more]
NAC90_ARATH7.841e-1534.72NAC domain-containing protein 90 OS=Arabidopsis th... [more]
NAC4_ARATH1.024e-1432.26NAC domain-containing protein 4 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05074C01SK DroRLeaf1 Citrus clementina cDNA clone C05074C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295628 ID=CX295628; Name=CX295628; organism=Citrus clementina; type=EST; length=727bp
GATTCGGCCGAGGGGATTGTTACATTTTCTTTGCTTTGATTTGGTCCATC
ATCAGTTCAGTTTGAGAGAGGGATTTATACATATATAAATATGGAGAAAC
AAAACAACTTCGTTGTGAATGGTGGGTTAAAGCTGCCTATTGGGTATAGG
TTTCGCCCCACAGATGAAGAGCTTGTGGTTCATTACTTGAAGCGTAAGGT
GTTTGGCTTGCCATTGCCTGCTTCCATTATTCCTGAGCTTGATGTGTTTC
AGTCTCATCCTCTGGGTTTGCCAGGTGATATGAAGGAGAAGAAGAGGTAT
TTTTTTAGCAATATTAGAAATGAGAGTGCGATTGCTAATGACGGCAAATG
CAAAATAGCTGCTGGTTCTGGTTACTGGAAACCTGTTGGCAAAAATAGGC
AAATTTTGGCTTCTGGGACTAAGCAAGTAGTTGGAATAAGAAAGACTCTG
ATTTTCTGCGAAGGCAAGCGCGGCCATGAGACCAAAACTCAATGGGTGAT
GCATCAATATCACCTTGTGGCCATTGCAACAAATACCAACTTAACCCAGC
CGGTATTTAAGATGGTGATCATAGGAGATTGGGTTGTGTATCGCATATTT
CAAAGGAAGAAAAAACCTAAAAAGCGTGGAGTTGTTTCTTCTAATAATCT
CAATATCACTAAGAACAGCCACAAAAATCAGCTGCAGGTTATTGATTTTA
GTGTTATTGAAGCTGATCAGACTGATT
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