CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C75_ARATH (Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.078e-45
Identity = 104/214 (48.60%), Postives = 133/214 (62.15%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSV-SSKISNCRCELQTPQCDAV-GSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARR 660
            KW+  M+ SF +MD+      V  + +  C C+   P+  A+ GS           +IV+N GDSRAVLCRNG+A+PLSNDHKPDRPDE  RIEAAGGRV+  DG RV G+LA SRAIGD YLKP V  EPEVT   R + DECL+LASDGLWDV+S++ AC + R C R ++                   Q+  ++ L A+ LLT+LAL R+
Sbjct:  191 KWRGVMKRSFKRMDEMATSTCVCGTSVPLCNCD---PREAAISGSTAVTAVLTHDHIIVANTGDSRAVLCRNGMAIPLSNDHKPDRPDERARIEAAGGRVLVVDGARVEGILATSRAIGDRYLKPMVAWEPEVTFMRRESGDECLVLASDGLWDVLSSQLACDIARFCLR-EETPSSLDLNRMAQEDDNDGEQNPSRSVL-AATLLTRLALGRQ 399          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C56_ARATH (Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 6.257e-42
Identity = 87/164 (53.05%), Postives = 110/164 (67.07%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            KWK+ +  SF ++D E++  SV+               + VGS        P  + V+NCGDSRAVLCR   A+PLS DHKPDR DE  RIEAAGG+VI W+G RV GVLAMSR+IGD YLKP +I +PEVT  +R  ED+CLILASDG+WDV+++E AC + R
Sbjct:  216 KWKKALFNSFLRVDSEIE--SVAP--------------ETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMAR 363          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C16_ARATH (Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.067e-41
Identity = 86/165 (52.12%), Postives = 107/165 (64.85%), Query Frame = 1
Query:   22 VKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            V+W +   + F  +D E++     + + +    L+    + VGS           ++VSNCGDSRAVL R   A+PLS DHKPDR DE  RIE AGG+VI W G RV GVLAMSR+IGD YLKPYVI EPEVT   R+ EDECLILASDGLWDV++N+  C + R
Sbjct:  284 VQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQEVCEIAR 448          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C06_ORYSJ (Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41
Identity = 97/211 (45.97%), Postives = 121/211 (57.35%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            KW+Q     F ++D+EV         +  R E   P+   VGS           +IV+NCGDSRAVLCR    VPLS DHKP+R DE  RIEA GG+VI W+G RV GVLAMSR+IGD YLKP++I  PE+T+  R  +DECL+LASDGLWDV+SNE  C V R     ++                    SSD A   A+  L+KLAL +
Sbjct:  248 KWEQAFVDCFSRVDEEVGG-------NASRGEAVAPE--TVGSTAVVAVICSSHIIVANCGDSRAVLCRGKQPVPLSVDHKPNREDEYARIEAEGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPVPEITIVPRAKDDECLVLASDGLWDVMSNEEVCDVAR-----KRILLWHKKNGTNPASAPRSGDSSDPAAEAAAECLSKLALQK 444          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C77_ARATH (Protein phosphatase 2C 77 OS=Arabidopsis thaliana GN=ABI2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.180e-40
Identity = 96/228 (42.11%), Postives = 123/228 (53.95%), Query Frame = 1
Query:   25 KWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALARRXXXXXXXXXXXLGGIK 708
            KWK+ +  SF ++D E++  + +               + VGS        P  + V+NCGDSRAVLCR    + LS DHKPDR DE  RIEAAGG+VI W+G RV GVLAMSR+IGD YLKP VI +PEVT   R  ED+CLILASDGLWDV++NE  C + R   R                      +  D A + A+  L+K+AL +            L GI+
Sbjct:  204 KWKKALFNSFMRVDSEIETVAHAP--------------ETVGSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGARVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEVCDLARK--RILLWHKKNAMAGEALLPAEKRGEGKDPAAMSAAEYLSKMALQKGSKDNISVVVVDLKGIR 415          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C07_ARATH (Protein phosphatase 2C 7 OS=Arabidopsis thaliana GN=HAB2 PE=2 SV=2)

HSP 1 Score: 165.622 bits (418), Expect = 2.629e-40
Identity = 97/212 (45.75%), Postives = 123/212 (58.02%), Query Frame = 1
Query:   22 VKWKQTMQASFGKMDKEVQDWSVSSKI--SNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFRAQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLAL 651
            V+W++     + K+D EV+   ++  +  S+ R  L+    + VGS           +IVSNCGDSRAVL R   ++PLS DHKPDR DE  RIE AGG+VI W G RV GVLAMSR+IGD YL+P+VI +PEVT   R  EDECLILASDGLWDV+SN+ AC   R    A                        D+AC  A+  L+KLA+
Sbjct:  283 VQWEKVFVDCYLKVDDEVKG-KINRPVVGSSDRMVLEAVSPETVGSTAVVALVCSSHIIVSNCGDSRAVLLRGKDSMPLSVDHKPDREDEYARIEKAGGKVIQWQGARVSGVLAMSRSIGDQYLEPFVIPDPEVTFMPRAREDECLILASDGLWDVMSNQEACDFARRRILA-------WHKKNGALPLAERGVGEDQACQAAAEYLSKLAI 486          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C53_ORYSJ (Probable protein phosphatase 2C 53 OS=Oryza sativa subsp. japonica GN=Os05g0592800 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.856e-40
Identity = 86/163 (52.76%), Postives = 101/163 (61.96%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            W++     F ++D EV          N          D VGS           +IV+NCGDSRAVLCR    +PLS DHKP+R DE  RIEA GG+VI W+G RVLGVLAMSR+IGD YLKPY+I  PEVTV  R  +D+CLILASDGLWDV+SNE  C   R
Sbjct:  224 WEKAFVDCFSRVDAEVG--------GNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNREDEYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAAR 378          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C37_ORYSJ (Probable protein phosphatase 2C 37 OS=Oryza sativa subsp. japonica GN=Os04g0167900 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 1.305e-39
Identity = 96/228 (42.11%), Postives = 115/228 (50.44%), Query Frame = 1
Query:  115 CELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHK----------------------------------------PDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCFR-------AQKXXXXXXXXXXXXXXXXXXXQSSDKACLDASILLTKLALAR 657
            C L       +GS          +L+VSNCGDSRAVLCR G  +PLS+DHK                                        PDRPDE  RIEA GGRV+Y +GPRV G+LAMSRA+GD YLKP VI EP++T+T RT +DECLILASDG+WDV+SNETA  V R C          +                    Q S+  C  A+ LL +LAL R
Sbjct:  230 CPLSGQTGAIIGSTAVVALLVRDRLVVSNCGDSRAVLCRAGDPLPLSSDHKGLNPSLSWRGTRVALARGTWGDKTGQSVGPAALLLSGGAHPDRPDEKARIEAVGGRVVYLNGPRVRGILAMSRALGDKYLKPEVICEPDITITVRTVDDECLILASDGMWDVISNETASDVARQCLEDGSPTSGRRAARSGEAASSSAGAPAAAVGQESEPRCYRAAALLARLALGR 457          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.104e-38
Identity = 86/165 (52.12%), Postives = 105/165 (63.64%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDA--VGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            W       F ++D EV      +++ N   E+++    A  VGS           ++V+NCGDSR VLCR    V LS DHKPDR DE  RIEA GG+VI W+G RV G+LAMSR+IGD YLKP+VI +PEV V  R  +D+CLILASDGLWDVVSNE AC V R
Sbjct:  160 WDDVFTKCFQRVDDEVS--GRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIEAQGGKVIQWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVMVVPRAKDDDCLILASDGLWDVVSNEEACKVAR 322          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.716e-28
Identity = 66/111 (59.46%), Postives = 83/111 (74.77%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            KLIV+N GDSR V  RNG AVPLS+DHKPDR DE  RIE AGG +I+    RV G+LA+SRA GD  LKPYVI+EPE+   E  +  E +++ASDGLW+V+SN+ A ++VR
Sbjct:  227 KLIVANVGDSRVVASRNGSAVPLSDDHKPDRSDERQRIEDAGGFIIWAGTWRVGGILAVSRAFGDKQLKPYVIAEPEIQ-EEDISTLEFIVVASDGLWNVLSNKDAVAIVR 336          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P2C75_ARATH2.078e-4548.60Probable protein phosphatase 2C 75 OS=Arabidopsis ... [more]
P2C56_ARATH6.257e-4253.05Protein phosphatase 2C 56 OS=Arabidopsis thaliana ... [more]
P2C16_ARATH1.067e-4152.12Protein phosphatase 2C 16 OS=Arabidopsis thaliana ... [more]
P2C06_ORYSJ1.820e-4145.97Probable protein phosphatase 2C 6 OS=Oryza sativa ... [more]
P2C77_ARATH1.180e-4042.11Protein phosphatase 2C 77 OS=Arabidopsis thaliana ... [more]
P2C07_ARATH2.629e-4045.75Protein phosphatase 2C 7 OS=Arabidopsis thaliana G... [more]
P2C53_ORYSJ5.856e-4052.76Probable protein phosphatase 2C 53 OS=Oryza sativa... [more]
P2C37_ORYSJ1.305e-3942.11Probable protein phosphatase 2C 37 OS=Oryza sativa... [more]
P2C50_ORYSJ1.104e-3852.12Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C11_ARATH6.716e-2859.46Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
back to top