CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.552e-27
Identity = 65/113 (57.52%), Postives = 80/113 (70.80%), Query Frame = 1
Query:  181 GKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            G L V+N GDSRAV+ + G A+ LS DHKP+R DE  RIE AGG VI+    RV GVLAMSRA G+  LKP+V++EPE+       + ECL+LASDGLWDVV NE A S+ +T
Sbjct:  214 GHLYVANVGDSRAVVSKAGKAMALSEDHKPNRSDERKRIENAGGVVIWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNEDLECLVLASDGLWDVVENEEAVSLAKT 326          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +L+V+N GDSRAV+CR G A+ +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+++PE+   +  +  E LILASDGLWDVVSNE A  +++
Sbjct:  137 RLLVANVGDSRAVICRGGNAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVSNEEAVGMIK 247          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.654e-26
Identity = 62/111 (55.86%), Postives = 81/111 (72.97%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +L+V+N GDSRAV+CR G A+ +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+++PE+      +  E LILASDGLWDVV+NE A ++V+
Sbjct:  168 RLLVANVGDSRAVICRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVK 278          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C10_ORYSJ (Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.160e-26
Identity = 63/111 (56.76%), Postives = 80/111 (72.07%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +L+V+N GDSRAV+CR G A+ +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+++PE+      +  E LILASDGLWDVVSN+ A  +VR
Sbjct:  186 RLLVANVGDSRAVVCRGGDAIAVSRDHKPDQSDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEIVDSSLEFLILASDGLWDVVSNKEAVDMVR 296          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.813e-26
Identity = 63/111 (56.76%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +L+V+N GDSRAV+CR G A  +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+++PE+   +     E LILASDGLWDV SNE A +VV+
Sbjct:  137 RLLVANVGDSRAVICRGGNAFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDSLEFLILASDGLWDVFSNEEAVAVVK 247          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C14_ARATH (Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 8.210e-26
Identity = 64/111 (57.66%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            ++IVSN GD RAVLCR GVA  L++DHKP R DE  RIE+ GG V    G  RV G+LA+SR+IGD +LK +V++EPE  V E   + E L+LASDGLWDVVSN+ A   V
Sbjct:  223 EMIVSNLGDCRAVLCRAGVAEALTDDHKPGRDDEKERIESQGGYVDNHQGAWRVQGILAVSRSIGDAHLKKWVVAEPETRVLELEQDMEFLVLASDGLWDVVSNQEAVYTV 333          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            L V+N GDSRAV+ + G A+ LS DHKP+R DE  RIE+AGG V+ W G  RV GVLAMSRA G+  LK +V+++PE+   E   E E LILASDGLWDVV NE A S+V+
Sbjct:  334 LYVANVGDSRAVISKAGKAIALSEDHKPNRSDERKRIESAGG-VVMWAGTWRVGGVLAMSRAFGNRLLKQFVVADPEIQEQEIDDELEFLILASDGLWDVVPNEDAVSLVK 443          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.389e-25
Identity = 61/112 (54.46%), Postives = 77/112 (68.75%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            +L V+N GDSRA++CR G A+ +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+ +PE+         E LILASDGLWDVV+NE A  + R+
Sbjct:  130 RLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRS 241          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.120e-25
Identity = 61/111 (54.95%), Postives = 79/111 (71.17%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +L+V+N GDSRAV+ R G A+ +S DHKPD+ DE  RIE AGG V++    RV GVLA+SRA GD  LK YV+++PE+   +     E LILASDGLWDV SNE A ++V+
Sbjct:  137 RLVVANVGDSRAVISRGGKAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDDTLEFLILASDGLWDVFSNEAAVAMVK 247          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.120e-25
Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            + V+N GDSR V+ + G A+ LS+DHKP+R DE  RIE AGG V+ W G  RV GVLAMSRA G+ +LK +V++EPEV   E   + E LILASDGLWDVVSNE A + V+
Sbjct:  220 IYVANVGDSRTVMSKAGKAIALSSDHKPNRKDERKRIENAGG-VVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLEFLILASDGLWDVVSNEHAVAFVK 329          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P2C13_ORYSJ2.552e-2757.52Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C59_ARATH5.685e-2755.86Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C59_ORYSJ1.654e-2655.86Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C10_ORYSJ2.160e-2656.76Probable protein phosphatase 2C 10 OS=Oryza sativa... [more]
P2C71_ARATH4.813e-2656.76Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C14_ARATH8.210e-2657.66Probable protein phosphatase 2C 14 OS=Arabidopsis ... [more]
P2C52_ORYSJ1.072e-2558.56Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C45_ORYSJ2.389e-2554.46Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C69_ARATH3.120e-2554.95Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C07_ORYSJ3.120e-2557.66Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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