CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C76_ARATH (Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.950e-25
Identity = 62/112 (55.36%), Postives = 80/112 (71.43%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            L V+N GDSR ++ + G A+ LS+DHKP+R DE  RIE+AGG VI W G  RV GVLAMSRA G+  LK +V++EPE+   E   E E L+LASDGLWDVV NE A ++ ++
Sbjct:  206 LYVANVGDSRTIVSKAGKAIALSDDHKPNRSDERKRIESAGG-VIMWAGTWRVGGVLAMSRAFGNRMLKQFVVAEPEIQDLEIDHEAELLVLASDGLWDVVPNEDAVALAQS 316          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C30_ARATH (Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.449e-24
Identity = 62/113 (54.87%), Postives = 75/113 (66.37%), Query Frame = 1
Query:  181 GKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            G+L VSN GD RAV+ R G A  L++DH P + +EL RIEA GG V   +G  R+ G LA+SR IGD YLK +VI+EPE        E E LILASDGLWD V+N+ A  VVR
Sbjct:  235 GELAVSNAGDCRAVMSRGGTAEALTSDHNPSQANELKRIEALGGYVDCCNGVWRIQGTLAVSRGIGDRYLKEWVIAEPETRTLRIKPEFEFLILASDGLWDKVTNQEAVDVVR 347          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C25_ARATH (Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.004e-23
Identity = 64/132 (48.48%), Postives = 79/132 (59.85%), Query Frame = 1
Query:  148 GSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR-TCFRAQK 537
            GS         G L+VSN GD RAV+   GVA  LS+DH+P R DE  RIE  GG V  + G  R+ G LA+SR IGD  LK +VI+EPE  ++    + E LILASDGLWD VSN+ A  + R  C   +K
Sbjct:  231 GSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSRDDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVSNQEAVDIARPLCLGTEK 362          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 60/110 (54.55%), Postives = 74/110 (67.27%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            L V N GDSR V  + G AVPLS DHKP+R DE  RIE AGG V++ D  RV G+LAMSRA G+  LK YV +EP++         E LILA+DGLWDV+ NE A S+++
Sbjct:  202 LYVGNVGDSRVVALKAGKAVPLSEDHKPNRKDEQKRIEDAGGIVVFDDTWRVNGLLAMSRAFGNRALKHYVKAEPDIQEKVVDESLEYLILATDGLWDVMRNEDAVSLLK 311          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 59/124 (47.58%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  148 GSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            GS         G L+V+N GD RAVL   G A  L++DH+P R DE  RIE++GG V  ++   R+ G LA+SR IGD +LK ++ISEPE+ +     + E LILASDGLWD VSN+ A  + R
Sbjct:  214 GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIESSGGYVDTFNSVWRIQGSLAVSRGIGDAHLKQWIISEPEINILRINPQHEFLILASDGLWDKVSNQEAVDIAR 337          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.228e-22
Identity = 63/144 (43.75%), Postives = 85/144 (59.03%), Query Frame = 1
Query:  112 RCELQTPQC-----DAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGP-RVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTCF 525
            RC L+T +      ++ G+         G L+VSN GD RAVL R G A  L++DH+  R DE  RIE  GG V+ + G  RV G LA+SR IGD +LK +V+S+P+ T     ++ E LILASDGLWD V N+ A  + R  +
Sbjct:  208 RCYLKTDEEFLKREESGGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIENLGGFVVNYRGTWRVQGSLAVSRGIGDAHLKQWVVSDPDTTTLGVDSQCEFLILASDGLWDKVENQEAVDIARPLY 351          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.507e-22
Identity = 58/113 (51.33%), Postives = 79/113 (69.91%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAED--ECLILASDGLWDVVSNETACSVVR 516
            +L V+N GDSRAV  + G AVPLS DHKP++ DE  RIE AGG V+  D  RV G+LA+SRA G+  +K YV +EP   + E+  ++  E L+LA+DGLWDV+ NE A S+++
Sbjct:  227 RLYVANVGDSRAVALKAGKAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGNRLMKRYVKAEP--NIQEKVVDEGLEYLVLATDGLWDVMRNEDAVSLLK 337          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.088e-21
Identity = 59/113 (52.21%), Postives = 76/113 (67.26%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG--PRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            KL+V+N GDSRAV+C+NGVA PLS DH+P+   +   IE  GG V  + G  PRV G LA++RA GD  LK ++ SEP VTV     + E LILASDGLW V+SN+ A   ++
Sbjct:  146 KLVVANVGDSRAVICQNGVAKPLSVDHEPNMEKD--EIENRGGFVSNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPYVTVEIIDDDAEFLILASDGLWKVMSNQEAVDSIK 256          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PP2C1_YEAST (Protein phosphatase 2C homolog 1 OS=Saccharomyces cerevisiae GN=PTC1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.952e-21
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = 1
Query:   31 KQTMQASFGKMDKEVQDWSVSSKISNCR---CELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            +  +  SF  +D+E+    V +  S C    C L+    D+V            KL  +N GDSR VL RNG ++ L+ DHK     E+ R+E AGG ++     RV G+LA++R++GD +    V+  P  T  E T+ED+ LILA DGLWDV+ ++ AC +++
Sbjct:   90 RDVLNDSFLAIDEEINTKLVGN--SGCTAAVCVLRWELPDSVSDDSMDLAQHQRKLYTANVGDSRIVLFRNGNSIRLTYDHKASDTLEMQRVEQAGGLIMK---SRVNGMLAVTRSLGDKFFDSLVVGSPFTTSVEITSEDKFLILACDGLWDVIDDQDACELIK 249          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.946e-20
Identity = 61/136 (44.85%), Postives = 73/136 (53.68%), Query Frame = 1
Query:  139 DAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRT 519
            D  GS        P  +   NCGDSRAVLCRNG     + DHKP  P E  RI+ AGG V+     RV G LA+SRA+GD   K           V  EPEV    R  EDE ++LA DG+WDV+SNE  C  V++
Sbjct:  128 DRSGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMI---QRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEIVRAEEDEFVVLACDGIWDVMSNEELCEFVKS 260          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
P2C76_ARATH6.950e-2555.36Probable protein phosphatase 2C 76 OS=Arabidopsis ... [more]
P2C30_ARATH3.449e-2454.87Probable protein phosphatase 2C 30 OS=Arabidopsis ... [more]
P2C25_ARATH1.004e-2348.48Probable protein phosphatase 2C 25 OS=Arabidopsis ... [more]
P2C56_ORYSJ2.920e-2354.55Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C02_ARATH2.920e-2347.58Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C32_ORYSJ3.228e-2243.75Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
P2C55_ORYSJ5.507e-2251.33Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C39_ARATH6.088e-2152.21Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
PP2C1_YEAST7.952e-2136.36Protein phosphatase 2C homolog 1 OS=Saccharomyces ... [more]
PPM1B_MOUSE3.946e-2044.85Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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