CX295636

Overview
NameCX295636
Unique NameCX295636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length759
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15
Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG---PRVLGVLAMSRAIGDNYLKPY-VISEPEV-TVTERTAEDECLILASDGLWDVVSNETACSVVRTC 522
            +L+V++ GDSRA+LCR G    L+ DH P+R +E LRI+ +GG  + W+    P V G LAM+R+IGD  LK   VI+EPE   V  +  +D  L+L +DG+  +V+++  C ++  C
Sbjct:  201 ELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGG-FVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQC 317          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C75_ORYSJ (Probable protein phosphatase 2C 75 OS=Oryza sativa subsp. japonica GN=Os11g0417400 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15
Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVRTC 522
            LIV N GDSRAVL         VA  L+ D KPD P E  RI    GRV  + D P V  +         LAM+RA GD  LK + +IS P+VT  + T +DE ++LA+DG+WDV+SN+    VV +C
Sbjct:  192 LIVGNLGDSRAVLGTRDQNDKLVAHQLTVDLKPDHPREARRIRRCNGRVFAHQDEPDVARLWLPNCNSPGLAMARAFGDFCLKDFGLISVPDVTYRQITEKDEFIVLATDGVWDVLSNQEVVDVVASC 319          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C70_ORYSJ (Probable protein phosphatase 2C 70 OS=Oryza sativa subsp. japonica GN=Os09g0558000 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15
Identity = 51/119 (42.86%), Postives = 68/119 (57.14%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLK---------PYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            +LIV+N GDSR VL R G A  LS DHKPD   E  RI  AGG ++     RV G L ++RAIGD  LK           V +EPE+   + + +DE ++LA DG+WD +S++     V
Sbjct:  171 ELIVANAGDSRCVLSRKGRAYDLSKDHKPDLDAEKERILNAGGFIV---AGRVNGSLNLARAIGDMELKQNEFLPAERQIVTAEPELNTVKLSEDDEFIVLACDGIWDCMSSQEVVDFV 286          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.006e-15
Identity = 50/112 (44.64%), Postives = 66/112 (58.93%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG--PRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            L ++N GDSRA++   G A  +S DH PD   E   IE+ GG V    G  PRV G+LA+SR  GD  LK Y+ SEPE+      +  + LILASDG+  V+SN+ A  V +
Sbjct:  139 LWIANVGDSRAIVSSRGKAKQMSVDHDPDDDTERSMIESKGGFVTNRPGDVPRVNGLLAVSRVFGDKNLKAYLNSEPEIKDVTIDSHTDFLILASDGISKVMSNQEAVDVAK 250          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 66/184 (35.87%), Postives = 89/184 (48.37%), Query Frame = 1
Query:   10 PRESVKWKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVL-----CRNGVAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            P   +  KQ+   +F  MDKE++                T  C   GS           L+V N GDSRA++       N  AV L+ D KP+ P E  RI+   GRV    D P V  V         LAM+RA GD  LK Y +IS P+++    T +DE +ILA+DG+WDV+SN+ A  +V
Sbjct:  191 PEMFLPLKQSYFKAFKLMDKELKMHP-------------TVDCFCSGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANNLTAVQLTVDLKPNLPREAARIQQCRGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDYGLISVPQISYRRLTEKDEFIILATDGVWDVLSNKEAVDIV 361          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 47/119 (39.50%), Postives = 70/119 (58.82%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDGPRVLGVLAMSRAIGDNYLKPY---------VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVVR 516
            L+++N GD RAVL R G A+ +S DH+P    E LR+E+ GG   Y D   + G+L ++RA+GD +L+           + +EPE+ +   T +DE LI+ SDG+WDV SN+      R
Sbjct:  174 LLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVESLGG---YVDDGYLNGLLGVTRALGDWHLEGMKEAGNPGGPLSAEPELKMITLTKDDEFLIIGSDGIWDVFSNQNVVDFAR 289          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15
Identity = 48/107 (44.86%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNG-VAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG--PRVLGVLAMSRAIGDNYLKPYVISEPEVTVTERTAEDECLILASDGLWDVVSNE 495
            K++V+N GDSRA+LCR   V   ++ DH+PD+  +L  +++ GG V    G  PRV G LAM+RA GD  LK ++   P + + E   + + LILASDGLW V+SN+
Sbjct:   91 KIVVANVGDSRAILCRESDVVKQITVDHEPDKERDL--VKSKGGFVSQKPGNVPRVDGQLAMTRAFGDGGLKEHISVIPNIEIAEIHDDTKFLILASDGLWKVMSND 195          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: PPM1K_HUMAN (Protein phosphatase 1K, mitochondrial OS=Homo sapiens GN=PPM1K PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = 1
Query:  184 KLIVSNCGDSRAVLCRNGVAVPLSNDHKPDRPDELLRIEAAGGRVIYWDG---PRVLGVLAMSRAIGDNYLKPY-VISEPEV-TVTERTAEDECLILASDGLWDVVSNETACSVVRTC 522
            +L+V++ GDSRA+LCR G  + L+ DH P+R DE  RI+  GG  + W+    P V G LAM+R+IGD  LK   VI+EPE   +    A+D  L+L +DG+  +V+++  C  V  C
Sbjct:  200 ELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGG-FVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVNQC 316          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C52_ARATH (Probable protein phosphatase 2C 52 OS=Arabidopsis thaliana GN=At4g03415 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15
Identity = 68/178 (38.20%), Postives = 83/178 (46.63%), Query Frame = 1
Query:   28 WKQTMQASFGKMDKEVQDWSVSSKISNCRCELQTPQCDAVGSXXXXXXXXPGKLIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVIYW-DGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            W +    SF  MDKE++    S    +C C          GS           L + N GDSRA+L         VA  L+ D KPD P E  RI+   GRV    D P V  V         LAM+RA GD  LK Y VIS PE T    T  D+ ++LASDG+WDV+SNE    +V
Sbjct:  168 WGEAFLKSFKAMDKELR----SHPNLDCFCS---------GSTGVTILKQGSNLFMGNIGDSRAILGSKDSNDSMVATQLTVDLKPDLPREAERIKRCKGRVFAMEDEPEVPRVWLPYDDAPGLAMARAFGDFCLKEYGVISVPEFTHRVLTDRDQFIVLASDGVWDVLSNEEVVDIV 332          
BLAST of CX295636 vs. ExPASy Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.241e-15
Identity = 56/125 (44.80%), Postives = 70/125 (56.00%), Query Frame = 1
Query:  187 LIVSNCGDSRAVLCRNG-----VAVPLSNDHKPDRPDELLRIEAAGGRVI-YWDGPRVLGV---------LAMSRAIGDNYLKPY-VISEPEVTVTERTAEDECLILASDGLWDVVSNETACSVV 513
            L+V N GDSRAVL         +AV L+ D KPD P E  RI+   GRV    D P V  V         LAM+RA GD  LK Y +IS P++     T  D+ +ILASDG+WDV+SN+ A  +V
Sbjct:  235 LVVGNIGDSRAVLATRDEDNALLAVQLTIDLKPDLPGESARIQKCKGRVFALQDEPEVARVWLPNSDSPGLAMARAFGDFCLKDYGLISVPDINYRRLTERDQFIILASDGVWDVLSNKEAVDIV 359          
The following BLAST results are available for this feature:
BLAST of CX295636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
PPM1K_XENLA1.006e-1541.53Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]
P2C75_ORYSJ1.006e-1544.53Probable protein phosphatase 2C 75 OS=Oryza sativa... [more]
P2C70_ORYSJ1.006e-1542.86Probable protein phosphatase 2C 70 OS=Oryza sativa... [more]
P2C17_ARATH1.006e-1544.64Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C66_ORYSJ1.314e-1535.87Probable protein phosphatase 2C 66 OS=Oryza sativa... [more]
P2C54_ORYSJ1.314e-1539.50Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]
P2C28_ARATH1.314e-1544.86Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
PPM1K_HUMAN1.716e-1542.37Protein phosphatase 1K, mitochondrial OS=Homo sapi... [more]
P2C52_ARATH1.716e-1538.20Probable protein phosphatase 2C 52 OS=Arabidopsis ... [more]
P2C18_ARATH2.241e-1544.80Probable protein phosphatase 2C 18 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC05074C09SK DroRLeaf1 Citrus clementina cDNA clone C05074C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295636 ID=CX295636; Name=CX295636; organism=Citrus clementina; type=EST; length=759bp
AGGATTCGGCCGAGGGAATCCGTGAAGTGGAAGCAGACAATGCAGGCGAG
CTTTGGGAAGATGGATAAGGAGGTGCAAGATTGGAGTGTGAGTTCCAAGA
TCTCTAACTGCCGCTGCGAGTTACAGACTCCGCAGTGCGACGCCGTTGGA
TCTACCGCCGTCGTTGCTGTCGTCACTCCTGGAAAGCTTATCGTCTCTAA
CTGCGGCGACTCTCGTGCTGTGCTCTGCCGAAACGGCGTCGCGGTTCCTC
TGTCCAACGATCATAAACCTGATCGCCCGGATGAGTTGCTTAGAATCGAA
GCCGCCGGCGGCCGTGTGATTTACTGGGACGGTCCGAGAGTGCTTGGCGT
TCTCGCGATGTCGAGAGCGATCGGAGACAATTACTTAAAGCCGTATGTGA
TATCGGAGCCGGAGGTGACCGTGACTGAGCGTACGGCGGAGGATGAGTGT
TTGATTCTGGCGAGCGATGGGTTATGGGACGTGGTGTCGAACGAGACGGC
GTGCAGCGTGGTGCGCACGTGTTTCCGAGCTCAGAAGGCGGCGGCTGCAG
CTTCACCACCCGGATCGCCGGGGAGCGAGGTGGCAGTGTCTGGTCAAAGC
TCTGACAAAGCTTGCTTGGACGCATCAATTTTGTTGACCAAGCTGGCCTT
GGCTAGGCGGAGTTCGGATAATGTCAGCGTTGTGGTGGTCGATTTAGGAG
GAATCAAGTCAAAGCAGGGATTAGTAGTAATTAAATGAGTATATATATAT
ATACGCAAT
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