CX295650
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295650 vs. ExPASy Swiss-Prot
Match: MAK5_ASPOR (ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae GN=mak5 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.587e-11 Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 8 WKSLGLSDLLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVR 304 W+SLGLS ++ + F P+ VQ A + P+L G+DV+ A TGSGKT ++ +P++E L +S+K T P A LVL P L Q+ + Sbjct: 186 WESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGRDVIGKASTGSGKTLAFGIPILEYYLEKLRSKTQKDSEKTETTPIA--LVLSPTRELAHQLAK 282
BLAST of CX295650 vs. ExPASy Swiss-Prot
Match: RH41_ARATH (DEAD-box ATP-dependent RNA helicase 41 OS=Arabidopsis thaliana GN=RH41 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.413e-11 Identity = 43/122 (35.25%), Postives = 65/122 (53.28%), Query Frame = 2 Query: 2 VTWKSLGLSDLLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALSADNGEPLVRAVAVCG 367 +T+ S GL L+ LE +G+ P+ +Q ++ L+GK ++ +A+TGSGKT S+LVP+I + CT S+ + P ++VL P LC QV A L G P A+ V G Sbjct: 110 LTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIISR-CTTYHSEHPSDQRRNPL-----AMVLAPTRELCVQVEDQAKMLG--KGLPFKTALVVGG 223
BLAST of CX295650 vs. ExPASy Swiss-Prot
Match: MAK5_ASPTN (ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mak5 PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 4.413e-11 Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 2 Query: 8 WKSLGLSDLLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVR 304 W+SLGLS ++ +L F P+ VQ + + P+L G DVV A TGSGKT ++ +P++E + DK+ T P A L+L P L Q+V+ Sbjct: 204 WESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPIA--LILSPTRELAHQLVK 300
BLAST of CX295650 vs. ExPASy Swiss-Prot
Match: RH47_ARATH (DEAD-box ATP-dependent RNA helicase 47 OS=Arabidopsis thaliana GN=RH47 PE=2 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.764e-11 Identity = 36/105 (34.29%), Postives = 63/105 (60.00%), Query Frame = 2 Query: 5 TWKSLGLSDLLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANAL 319 +++ LGL D L+ +LE GF P+ VQ+A+V ++ G D VI + TGSGKT +YL+P++ ++ S +S+S+ + ++++ P+ L Q+VR L Sbjct: 111 SFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKSRSSHSENDKR-TEIQAMIVAPSRELGMQIVREVEKL 214
BLAST of CX295650 vs. ExPASy Swiss-Prot
Match: SRMB_ECOLI (ATP-dependent RNA helicase srmB OS=Escherichia coli (strain K12) GN=srmB PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.832e-11 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 2 Query: 5 TWKSLGLSDLLIRALENSGFGRPSIVQAASVGPVLSGKDVVIAAETGSGKTHSYLVPLIEKLCTALGDSENSNSDKEPTPPRAPSLVLCPNVVLCEQVVRMANALS 322 T+ L L + L+ AL++ GF RP+ +QAA++ P L G+DV+ +A TG+GKT +YL+P ++ L K+ PPR L+L P L QV A L+ Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLL--------DFPRKKSGPPRI--LILTPTRELAMQVSDHARELA 100 The following BLAST results are available for this feature:
BLAST of CX295650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295650 ID=CX295650; Name=CX295650; organism=Citrus clementina; type=EST; length=410bpback to top |