CX295687

Overview
NameCX295687
Unique NameCX295687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 51/171 (29.82%), Postives = 81/171 (47.37%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIG-YKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTG------TGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPV 662
            RA ++EF+AT +F++    +V G +K   D               +A A    +   V  +   SGGH+NPAVTFG+ + R++S  RA +Y  AQ LGA+    L++           GG   +  G++ G        L  E++ TF LVYTV++    +R+      P+
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTG------TLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRL--------ASGGMRPM--GFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGDIAPL 183          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQPB_DICDI (Aquaporin B OS=Dictyostelium discoideum GN=wacA PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.588e-11
Identity = 48/170 (28.24%), Postives = 76/170 (44.71%), Query Frame = 3
Query:  165 FYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPL 674
            F R  +AEF  TL  +YI           T A +            I    G     +++  +GISG  +NPAVT G     ++ ++  + +++ QC+GA+ G G++KA   ++Y R    A  LA G +   G   E++ T  LV+ V        N  D  +  +APL
Sbjct:   30 FTRQLLAEFFGTLFVVYIV-------SGSTLAANFAVSDPIVRVCLICLVQGFAFAAIIWSISGISGCQLNPAVTVGCVTTGRMGILNGIAFIIFQCVGALVGAGMMKASLPTFYER-DLSATTLATGVNVARGFFLEMVTTSFLVFVVLGVA--VYNEWDPKISRVAPL 189          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.709e-11
Identity = 56/175 (32.00%), Postives = 81/175 (46.29%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVL-TVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAG--ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGA---NELADGYSTGTGLGAEIIGTFVLVYTVFSA-TDPKRNARDSHVPVLAPL 674
            RA   E + T LF++I V  T+   K+   A               A A    + V V  TAG  +SGGH+NPAVT  L +   ++L R+ +Y+ AQ  G+   C L++          GG A   + LADG     G+ AE + TF L+  + +   DP+R A     P+L  L
Sbjct:   24 RAVAGELLFTFLFVFIGVASTITAGKAAGGAGEAAAVT--------AAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLT-------GGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGL 183          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 56/168 (33.33%), Postives = 70/168 (41.67%), Query Frame = 3
Query:  165 FYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGA--------------EIIGTFVLVYTVFSATD 626
            F+R   AEF+ TL      VL V G  S   A               AW FG M+ V  Y   GISGGH+NPAVT  L + RK    +  +Y+  Q  GA  G  L   +  S  T + GG +      +TG  L                E IGT VLV  +F+  D
Sbjct:  309 FFREGFAEFLGTL------VLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLGV--YIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTP--ATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILD 466          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 49/157 (31.21%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNA 641
            RA  AEF+AT L+++  V +V+ + +   +              IA  F  +  + V  T   SG H NPAVT    +   +SL RAV Y+ AQ +GA  G  L+         R   G N + +  STG  +  E++ T  LV  VF++TD ++ +
Sbjct:   25 RALFAEFLATGLYVFFGVGSVMRWPTALPS-----------VLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPG-DIRETLGINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTS 169          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP2_RABIT (Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.036e-11
Identity = 41/108 (37.96%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 485
            +F RA  AEF+ATLLF++  + + + + S   +              IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFAEFLATLLFVFFGLGSALNWPSALPST-----------LQIAMAFGLGIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 485
            +F RA  AEF+ATL+F++  + + + ++    +              IA AFG  I  LV     ISG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVFAEFLATLIFVFFGLGSALNWQQSLPS-----------VLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 40/108 (37.04%), Postives = 57/108 (52.78%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 485
            +F RA ++EF+ATLLF++  + + + +     +              IA AFG  I  LV     ISG HINPAVT    +   VS +RA+ Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVLSEFLATLLFVFFGLGSALNWPQALPS-----------VLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP2_HORSE (Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.883e-11
Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLV 485
            +F RA +AEF+ATLLF++  + + + +     +              IA AFG  I  LV     +SG HINPAVT    +   VS +RA  Y+ AQ LGA+ G  L+
Sbjct:    3 AFSRAVLAEFLATLLFVFFGLGSALNWPQAMPS-----------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of CX295687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
TIP32_ORYSJ1.588e-1129.82Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQPB_DICDI1.588e-1128.24Aquaporin B OS=Dictyostelium discoideum GN=wacA PE... [more]
TIP42_ORYSJ2.709e-1132.00Probable aquaporin TIP4-2 OS=Oryza sativa subsp. j... [more]
YI7H_SCHPO6.036e-1133.33Uncharacterized membrane protein C977.17 OS=Schizo... [more]
AQP6_HUMAN6.036e-1131.21Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQP2_RABIT6.036e-1137.96Aquaporin-2 (Fragment) OS=Oryctolagus cuniculus GN... [more]
AQP2_TALEU7.883e-1137.04Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_PROHA7.883e-1137.04Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]
AQP2_HORSE7.883e-1137.04Aquaporin-2 (Fragment) OS=Equus caballus GN=AQP2 P... [more]

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Properties
Property NameValue
Genbank descriptionC05074H01SK DroRLeaf1 Citrus clementina cDNA clone C05074H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295687 ID=CX295687; Name=CX295687; organism=Citrus clementina; type=EST; length=679bp
CTCCTATTGGGAATTTTTTTTTTTTTTTAATTCTCAGTGAAGACCAATCC
GTAGCAATGGCCAAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGC
TAAGGATTACCATGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGC
TCACCCAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACG
CTCTTGTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCA
GACGGACGCCAACCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGG
GCATCGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACT
GCTGGTATCTCTGGTGGACACATTAACCCGGCGGTGACATTTGGGCTGTT
CTTGGCGCGGAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGTGGCTC
AGTGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAG
TCTTACTACACAAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTA
CAGCACTGGCACTGGATTGGGTGCTGAGATCATTGGTACCTTTGTTCTTG
TCTACACTGTTTTCTCCGCCACCGATCCCAAGAGAAATGCTAGGGACTCC
CATGTTCCTGTCTTGGCACCATTGCCAAT
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