CX295687

Overview
NameCX295687
Unique NameCX295687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.008e-72
Identity = 136/192 (70.83%), Postives = 150/192 (78.12%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PPPAP  +  EL+ WSFYRA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAICG G+VK FQ + Y   GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRAPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLP 214          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.366e-71
Identity = 135/192 (70.31%), Postives = 147/192 (76.56%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PPPAPL +  EL+ WSFYRA IAEF+AT LFLYIT+LTV+G K                   +AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAICG G+VK F    Y R GGGAN +  GY+ G GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLP
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFLYITILTVMGLKRSDSL------CSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 215          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.366e-71
Identity = 135/192 (70.31%), Postives = 149/192 (77.60%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PPPAP  +  EL+ WSF+RA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK FQ   Y   GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLP
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 214          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 1.366e-71
Identity = 135/192 (70.31%), Postives = 149/192 (77.60%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PPPAP  +  EL+ WSF+RA IAEFIAT LFLYITVLTV+G K   +               IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAICG G+VK FQ   Y   GGGAN +A GY+ G+GLGAEIIGTFVLVYTVFSATD KRNARDSHVP+LAPLP
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRSPNM------CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLP 214          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 268.085 bits (684), Expect = 3.043e-71
Identity = 132/192 (68.75%), Postives = 147/192 (76.56%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PP AP+ + EELT WSFYRA IAEF+AT LFLYI++LTV+G       N             IAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAICG G+VK FQ+  Y   GGGAN +  GY+ G GLGAEI+GTFVLVYTVFSATD KRNARDSHVP+LAPLP
Sbjct:   31 KDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFLYISILTVMG------VNKSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLP 216          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 262.307 bits (669), Expect = 1.670e-69
Identity = 133/202 (65.84%), Postives = 151/202 (74.75%), Query Frame = 3
Query:   75 VGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQ-KSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            +  Q +   KDY +PPPAPL +  ELT WSFYRA IAEFIAT LFLYITVLTV+G   ++                IAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAICG G+VK F+ K  +    GGAN +A GY+ G GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLP
Sbjct:   23 IAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFLYITVLTVMGVVRESSK------CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLP 218          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 4.858e-69
Identity = 132/219 (60.27%), Postives = 155/219 (70.78%), Query Frame = 3
Query:   36 SEDQSVAMAKDI-----EVGGQGEFHAKDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            SE++ V +  D       +G   +   +DY +PP APL +A EL+ WSFYRA IAEF+AT LFLY+TVLTV+G                     IAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+CG G+VKAF  + Y   GGGAN ++ GY+ G GLGAE++GTFVLVYTVFSATD KR ARDSHVP LAPLP
Sbjct:   10 SEEEDVRVGVDRFPERQPIGTAADDLGRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFLYVTVLTVMGVSKSPSK------CGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTVFSATDAKRTARDSHVPALAPLP 222          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.013e-66
Identity = 128/193 (66.32%), Postives = 146/193 (75.65%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQ-KSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY DPPPAPL+D  EL +WS YRA IAEF ATLL + I+V TVIG K Q+                IAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+CG GL +A      Y R+GGGANELA GYS G G+ AE++GTFVLVYTVFSATDPKR ARDSHVPVLAPLP
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGEG-------GAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLP 197          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 6.566e-66
Identity = 121/190 (63.68%), Postives = 141/190 (74.21%), Query Frame = 3
Query:  108 YHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            Y DPPPAPL+D  EL +WS YRA IAEF+ATL+FLY+++ TVIGYK+Q                 +AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SLVR V+Y+VAQCLGAI G G+VK   K  Y   GGGAN ++DGYS    LGAEI+GTF+LVYTVFSATDPKR ARDS +PVL PLP
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRAT---VDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLP 209          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.495e-65
Identity = 125/192 (65.10%), Postives = 142/192 (73.96%), Query Frame = 3
Query:  102 KDYHDPPPAPLIDAEELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLP 677
            KDY +PPPAPL +  EL  WSFYR  IAEF+AT LFLYI++LTV+G    T                IAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAICG G+VK FQ+  Y   GG  N +A GY+ G GLGAEI+GTF+LVYTVFSATD KR ARDSHVP+LAPLP
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFLYISILTVMGVSKSTSK------CATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRRARDSHVPILAPLP 215          
The following BLAST results are available for this feature:
BLAST of CX295687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PIP13_ARATH8.008e-7270.83Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP1_SOLLC1.366e-7170.31Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP11_VICFA1.366e-7170.31Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH1.366e-7170.31Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_ORYSJ3.043e-7168.75Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP2_PEA1.670e-6965.84Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP16_MAIZE4.858e-6960.27Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ1.013e-6666.32Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ6.566e-6663.68Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE2.495e-6565.10Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05074H01SK DroRLeaf1 Citrus clementina cDNA clone C05074H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295687 ID=CX295687; Name=CX295687; organism=Citrus clementina; type=EST; length=679bp
CTCCTATTGGGAATTTTTTTTTTTTTTTAATTCTCAGTGAAGACCAATCC
GTAGCAATGGCCAAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGC
TAAGGATTACCATGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGC
TCACCCAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACG
CTCTTGTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCA
GACGGACGCCAACCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGG
GCATCGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACT
GCTGGTATCTCTGGTGGACACATTAACCCGGCGGTGACATTTGGGCTGTT
CTTGGCGCGGAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGTGGCTC
AGTGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAG
TCTTACTACACAAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTA
CAGCACTGGCACTGGATTGGGTGCTGAGATCATTGGTACCTTTGTTCTTG
TCTACACTGTTTTCTCCGCCACCGATCCCAAGAGAAATGCTAGGGACTCC
CATGTTCCTGTCTTGGCACCATTGCCAAT
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