CX295687

Overview
NameCX295687
Unique NameCX295687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPL 674
            +E T     +A +AEFI+T +F++    + I Y   T  N             IA AF   +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y++AQ LG+I    L+     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+
Sbjct:   12 QEATHPDTLKAGLAEFISTFIFVFAGSGSGIAYNKLT--NDGAATPAGLISASIAHAFA--LFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPI 176          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTG----LGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            EE+   +  RA +AEFI+TL+F++    + I +   TD  +            +A AFG  +FV V   A ISGGH+NPAVTFG+ L   ++L+R ++Y +AQ LG++  C     F  S+ T   GG    A G S G G    L  EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITD--NGATTPSGLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-----FLLSFAT---GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPI 178          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            +F++A  AEF+A L+F+ ++V + I +    +               I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENP-------LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.213e-19
Identity = 57/158 (36.08%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            +F++A  AEF+A L+F+ ++V + I +    +               I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR
Sbjct:   36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENP-------LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 185          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.070e-19
Identity = 56/158 (35.44%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            +F++A  AEF+A L+F+ +++ + I +  + +               I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENP-------LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.611e-19
Identity = 66/168 (39.29%), Postives = 92/168 (54.76%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGA---NELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            RA +AEFI+TLLF++  V + I Y   T                IA   G  +FV V   A ISGGH+NPAVTFGL +  +++++  V Y +AQ LG+   C L+K     Y T  GG A   + +A G  +  G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTS----DAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLK-----YVT--GGLAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPL 175          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 6.022e-19
Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            +F++A  AEF+A L+F+ +++ + I +                    I+  FG  I  +V C   ISGGHINPAVT  +   R++S+ ++V Y+ AQCLGAI G G++           G G   +    S G GL  E+I TF LV+T+F++ D KR
Sbjct:   33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAEKP-------LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 7.865e-19
Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = 3
Query:  162 SFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKR 635
            +F++A  AEF+A L+F+ +++ + I +                    I+  FG  I  +V C   ISGGHINPAVT  +   RK+S+ ++V Y+ AQCLGAI G G++           G G   +    + G GL  E+I TF LV+T+F++ D KR
Sbjct:   33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTEKP-------LPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKR 182          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.288e-18
Identity = 56/166 (33.73%), Postives = 86/166 (51.81%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNA 641
            +E+   +F +A  AEF+ATL+F++  + + + + S                  IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+VAQ +GAI G G++         R     N L +  + G  +  E+I TF L   +FS+TD +R +
Sbjct:    3 KEVCSLAFLKAVFAEFLATLIFVFFGLASALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPG-NARGNLAVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTS 156          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 2.989e-18
Identity = 62/165 (37.58%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            +A +AEFIATLLF++  V + I Y   T                IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  ++Y VAQ LGA   C L++     Y T           G S   G+  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGG----ALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQ-----YVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGSLGTIAPM 174          
The following BLAST results are available for this feature:
BLAST of CX295687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
TIP1_MEDTR1.213e-1935.96Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ARATH1.213e-1938.20Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
AQP4_RAT1.213e-1936.08Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_NOTAL1.213e-1936.08Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
AQP4_DIPME2.070e-1935.44Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
TIP21_ARATH4.611e-1939.29Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
AQP4_BOVIN6.022e-1935.44Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP4_HUMAN7.865e-1935.44Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP5_PIG2.288e-1833.73Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1[more]
TIP23_MAIZE2.989e-1837.58Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC05074H01SK DroRLeaf1 Citrus clementina cDNA clone C05074H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295687 ID=CX295687; Name=CX295687; organism=Citrus clementina; type=EST; length=679bp
CTCCTATTGGGAATTTTTTTTTTTTTTTAATTCTCAGTGAAGACCAATCC
GTAGCAATGGCCAAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGC
TAAGGATTACCATGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGC
TCACCCAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACG
CTCTTGTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCA
GACGGACGCCAACCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGG
GCATCGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACT
GCTGGTATCTCTGGTGGACACATTAACCCGGCGGTGACATTTGGGCTGTT
CTTGGCGCGGAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGTGGCTC
AGTGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAG
TCTTACTACACAAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTA
CAGCACTGGCACTGGATTGGGTGCTGAGATCATTGGTACCTTTGTTCTTG
TCTACACTGTTTTCTCCGCCACCGATCCCAAGAGAAATGCTAGGGACTCC
CATGTTCCTGTCTTGGCACCATTGCCAAT
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