CX295687

Overview
NameCX295687
Unique NameCX295687
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.903e-18
Identity = 64/178 (35.96%), Postives = 96/178 (53.93%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTG-LGA---EIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            +E T+    +A +AEFI+TL+F+     + + +   T+  +            +A AFG  +FV V   A ISGGH+NPAVTFG F+   ++L+R ++Y +AQ LG++  C ++K           GG    A G S G G L A   EI+ TF LVYTV+ +A DPK  +  +  P+
Sbjct:   12 DEATRPDALKAALAEFISTLIFVVAGSGSGMAFNKLTE--NGATTPSGLVAAAVAHAFG--LFVAVSVGANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFAT--------GGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPI 177          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18
Identity = 66/180 (36.67%), Postives = 94/180 (52.22%), Query Frame = 3
Query:  147 ELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGG---GANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPL 674
            EL+     +A +AEFI+ L+F++    + + +   TD                A A    +FV V   A ISGGH+NPAVTFG F+   +SLV+AV+Y VAQ LG++  C L+K          GG   GA  L+ G      +  EI+ TF LVYTV+ +A DPK+      + V+AP+
Sbjct:   13 ELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALA----LFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLK-------IATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPI 177          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.098e-18
Identity = 55/166 (33.13%), Postives = 88/166 (53.01%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNA 641
            +E+   +F +A  AEF+ATL+F++  + + + + S   +              I+ AFG  I  +      +SGGH+NPA+T  L +  ++SL+RAV Y+VAQ +GAI G  ++      Y  R     N L +  + G  + AE+I TF L   VFS+TD +R +
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPSAMPS-----------VLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS 156          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.696e-18
Identity = 61/169 (36.09%), Postives = 88/169 (52.07%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPL 674
            +A +AEFIATLLF++  V + I Y   T                +A A    +FV V   A +SGGH+NPAVT GL +   ++++  + Y +AQCLG+   C L+K           G    +A G     G+  EII TF LVYTV+ +A DPK+ +    + V+AP+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTS----DAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHG----VAAGMDAIQGVVMEIIITFALVYTVYATAADPKKGS----LGVIAPI 175          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.696e-18
Identity = 62/180 (34.44%), Postives = 91/180 (50.56%), Query Frame = 3
Query:  141 AEELTQWSFYRATIAEFIATLLFLYITVLTVIGY-KSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFS-ATDPKRNARDSHVPVLAPL 674
            A+E T     RAT+AEF++T +F++    +++   K   D               +A A    +F  V     +SGGH+NPAVTF   +  ++S++RA+ Y VAQ +GAI  C L++                +A G S   GL  EII TF LVY V+S A DPKR +    + ++APL
Sbjct:   14 ADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRP----VGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPL 185          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.696e-18
Identity = 63/167 (37.72%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVK--AFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            +A +AEFIATLLF++  V + I Y   T+               IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  + Y +AQ LGA   C L+K     K+  T    G +EL        G+  EI+ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGG----ALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISEL-------EGVVMEIVITFALVYTVYATAADPKKGSLGTIAPI 174          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.136e-17
Identity = 61/165 (36.97%), Postives = 86/165 (52.12%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            +A +AEFI+TL+F++  V + I Y   T                +A   G  +FV V   A ISGGH+NPAVTFGL L  +++++  V Y +AQ LGAI G  LV+         +G        G     G+  EII TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGG----APLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHG------LSGVGAFEGVVMEIIVTFGLVYTVYATAADPKKGSLGTIAPI 174          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.136e-17
Identity = 64/180 (35.56%), Postives = 95/180 (52.78%), Query Frame = 3
Query:  147 ELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGG---GANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPVLAPL 674
            EL+     +A +AEFI+TL+F++    + + +   TD                A A    +FV V   A ISGGH+NPAVTFG F+   +SL++A++Y VAQ LG++  C L+K          GG   GA  L+ G      +  E++ TF LVYTV+ +A DPK+      + V+AP+
Sbjct:   13 ELSHPDTAKAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATPAGLIAASLAHALA----LFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLK-------IATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPI 177          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 3
Query:  171 RATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVF-SATDPKRNARDSHVPV 662
            +A +AEFIATLLF++  V + I Y   T+               IA A    +FV V   A ISGGH+NPAVTFGL +   ++++  V Y VAQ LGA   C L+      + T           G S   G+  E++ TF LVYTV+ +A DPK+ +  +  P+
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLTNGG----ALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLL-----GFVTHGKAIPTHAVAGISELEGVVFEVVITFALVYTVYATAADPKKGSLGTIAPI 174          
BLAST of CX295687 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.483e-17
Identity = 54/166 (32.53%), Postives = 87/166 (52.41%), Query Frame = 3
Query:  144 EELTQWSFYRATIAEFIATLLFLYITVLTVIGYKSQTDANHXXXXXXXXXXXXIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNA 641
            +E+   +F++A  AEF+ATL+F++  + + + + S                  I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RAV Y+ AQ +GAI G G++  +      R     N L +  + G  +  E+I TF L   +FS+TD +R +
Sbjct:    3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL-YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS 156          
The following BLAST results are available for this feature:
BLAST of CX295687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
TIP11_ARATH3.903e-1835.96Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ORYSJ5.098e-1836.67Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP5_SHEEP5.098e-1833.13Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP_ANTMA8.696e-1836.09Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP32_ARATH8.696e-1834.44Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP21_ORYSJ8.696e-1837.72Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]
TIP22_ORYSJ1.136e-1736.97Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
TIP12_MAIZE1.136e-1735.56Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP21_MAIZE1.483e-1736.97Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
AQP5_RAT1.483e-1732.53Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC05074H01SK DroRLeaf1 Citrus clementina cDNA clone C05074H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295687 ID=CX295687; Name=CX295687; organism=Citrus clementina; type=EST; length=679bp
CTCCTATTGGGAATTTTTTTTTTTTTTTAATTCTCAGTGAAGACCAATCC
GTAGCAATGGCCAAGGACATTGAGGTTGGTGGGCAAGGCGAGTTCCATGC
TAAGGATTACCATGACCCTCCGCCAGCTCCATTGATCGATGCCGAGGAGC
TCACCCAATGGTCATTTTACAGGGCTACTATAGCTGAGTTCATCGCCACG
CTCTTGTTTTTGTACATTACTGTGCTGACAGTGATTGGTTACAAAAGCCA
GACGGACGCCAACCACGGCGGTGACGGATGTGGTGGTGTTGGCATTCTGG
GCATCGCTTGGGCCTTTGGTGGCATGATCTTTGTTCTTGTTTACTGCACT
GCTGGTATCTCTGGTGGACACATTAACCCGGCGGTGACATTTGGGCTGTT
CTTGGCGCGGAAGGTGTCACTGGTGCGAGCCGTAATGTACATGGTGGCTC
AGTGTTTGGGAGCCATATGTGGCTGCGGGCTCGTTAAGGCTTTCCAGAAG
TCTTACTACACAAGATACGGCGGTGGAGCCAATGAGCTCGCTGATGGGTA
CAGCACTGGCACTGGATTGGGTGCTGAGATCATTGGTACCTTTGTTCTTG
TCTACACTGTTTTCTCCGCCACCGATCCCAAGAGAAATGCTAGGGACTCC
CATGTTCCTGTCTTGGCACCATTGCCAAT
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