CX295688
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: SXL_CERCA (Sex-lethal homolog OS=Ceratitis capitata GN=SXL PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 46/148 (31.08%), Postives = 78/148 (52.70%), Query Frame = 3 Query: 150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKKDKSSYGF----VDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR-EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 575 N PQ +T+ L +F + GP+ C++++ K+ Y F VD+ + AI +LNG + + +KV++A + +DT N++V +L +TD L F + ++ D+ TG+ RG FV F +E+AQ AI+ LN Sbjct: 115 NYLPQDMTDRELYALFRTIGPINTCRIMRDYKTGYSFGYAFVDFAAETDSQRAIKSLNGITVRNKRLKVSYARPGGESIKDT----NLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 258
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: RBM42_XENLA (RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.204e-11 Identity = 31/73 (42.47%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 387 FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIR 605 F +F GDL EV D L FS +P+ A+V+ D++TG+++G+GFVSF++ D A ++NGK++G+R I+ Sbjct: 293 FRIFCGDLGNEVNDDILARAFSRYPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDYVRATREMNGKYVGSRPIK 365
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: SF3B4_DICDI (Splicing factor 3B subunit 4 OS=Dictyostelium discoideum GN=sf3b4 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 48/183 (26.23%), Postives = 86/183 (46.99%), Query Frame = 3 Query: 90 LSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDK-----SSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623 ++ NLP + C + + ++ P VT +LL E+F P+ I KDK S +V++ A A+ + +F + IK+ ++ N+F+G+L +V + L FS F T + + G S+GF F++F + E + +AI +N ++L N+ I +A K Sbjct: 1 MASNLPQERNHEAC--LLIRDLDPMVTESLLMELFIQAAPVVKV-FIPKDKLTQQHSGRAYVEFQSSSDAEYALKVMKFVRLFNKEIKIK----KENKDKVDIGANLFIGNLDADVDERILHDTFSRFGTIIFTPKVMRDENGVSKGFAFINFDSFEASDAAIEAMNSQFLCNKPISVTYARK 176 The following BLAST results are available for this feature:
BLAST of CX295688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295688 ID=CX295688; Name=CX295688; organism=Citrus clementina; type=EST; length=700bpback to top |