CX295688

Overview
NameCX295688
Unique NameCX295688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASPTN (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=pab1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.882e-16
Identity = 55/186 (29.57%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   66 AAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            AAP  E   +    P        S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   26 AAPAAEATAAETAAPSTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 206          

HSP 2 Score: 73.1738 bits (178), Expect = 1.526e-12
Identity = 52/198 (26.26%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ +L  E+++      F  F   + A +  DQ+ G+SRGFGFV++   + AQ+A++++N K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  137 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQE-GKSRGFGFVNYSTHDSAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 333          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 53/160 (33.12%), Postives = 83/160 (51.88%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            S+YVG++HP VT  +L + F+    L   +L K   S     YG+ ++  R+ A LAI   N   + G+ I+V W+  +      +G  NVFV +L   VT+A L   F  F      +V    + G+SRG+GFV F  ++ A +AI  LN   + +++I
Sbjct:   25 SLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDAR-RNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVA-TLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEI 182          

HSP 2 Score: 68.9366 bits (167), Expect = 2.879e-11
Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL--IKKDKS-SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR-EDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGA 629
            +V+V N+   VTNA+LQ++F   G +  CK+  ++  KS  YGFV +    +A  AI TLN   +  + I V      + R +    + N+++ +L  +V++  L   F+ F       +  D+     RG+ FV+F N EDA+ A   +NG   G++ +    A K A
Sbjct:  113 NVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENR-LCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKA 280          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.070e-16
Identity = 50/159 (31.45%), Postives = 85/159 (53.46%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            S+YVG++ P V  + L ++F+   P+     C+ +      Y +V++ +   A+ A+ +LN   I  +PI++  +         SG  NVF+ +L   + +  L+  FS F T    +V  D   GRS+G+GFV F  +E AQ+AI+ LNG  L ++Q+
Sbjct:   46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTR-LSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQV 202          

HSP 2 Score: 77.0258 bits (188), Expect = 1.057e-13
Identity = 61/194 (31.44%), Postives = 88/194 (45.36%), Query Frame = 3
Query:   87 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAY-----ASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 644
            I+  N  P    S   +V++ N+   + N  L E FSS G +  CK+   +      YGFV +    +A  AI  LNG  +  + + V         A S+        NV+V +L  E+TD  L   F  +   S A VM DQ +G SR FGFV+F + E A  A+  +NG  LG   +    A K +   +E
Sbjct:  117 IMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQ-SGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEE 309          

HSP 3 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 50/175 (28.57%), Postives = 89/175 (50.86%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKS----SYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGH---------------FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            +VYV N+  ++T+  L++ F   G +    ++ KD+S    S+GFV++    +AA+A+  +NG  +    + V  A   S RE+                    N+++ +L   V D  L   FS +   +  +VM + + G SRGFGFV++ N E+A  A+ ++NGK +G + +
Sbjct:  226 NVYVKNLPKEITDDELKKTFGKYGDISSA-VVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPL 398          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 61/198 (30.81%), Postives = 98/198 (49.49%), Query Frame = 3
Query:   21 MMQQQSLYQYHPSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCK----LIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            M Q Q   Q      AA    P  SG        +T  S+YVG++   VT++ L + F   G +   +    L+ +    YG+V++ + + AA AI  LN   ++G+PI+V +++        SG  N+F+ +L   +    L   FS F      +V  D  +G+S+G+GFV + N+E AQ AI  LNG  L ++Q+
Sbjct:    1 MAQVQLQGQTPNGSTAAVTSAPATSGGATATQFGNT--SLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVR-RSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDS-SGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQV 194          

HSP 2 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 55/197 (27.92%), Postives = 93/197 (47.21%), Query Frame = 3
Query:   87 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLI---KKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHF---NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQVQI 659
            ++  +  P    S   ++++ N+   + +  L + FSS G +  CK+          YGFV Y +  SA  AI  LNG  +  + + V       +R+ T+      NV+V +L+   TD  L   F  +   + A VM D + G+S+GFGFV+F N +DA  A+  LNG    +++    W    A    E++ ++
Sbjct:  109 VMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGE-GKSKGFGFVNFENADDAARAVESLNGHKFDDKE----WYVGRAQKKSERETEL 300          

HSP 3 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 50/174 (28.74%), Postives = 84/174 (48.28%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---------------DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            +VYV N+    T+  L+  F   G +    ++K  +     +GFV++ +   AA A+ +LNG     +   V  A   S+RE               D     N++V +L P ++D  L   FS F T + ++VM D   G S+G GFV+F   E+A  A++ L+GK + ++ +
Sbjct:  216 NVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPN-GTSKGSGFVAFATPEEATEAMSQLSGKMIESKPL 388          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.621e-16
Identity = 55/149 (36.91%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            N  PQ +T   L+ +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++ DQ TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   72 NYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 217          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 53/168 (31.55%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  120 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            A +  S+YVG ++  V  A L E+FS  G +   ++    + K    Y +V+Y        AI  LN   I G+P ++ W    SQR+ +   SG  N+F+ +L P + +  L   FS F      +V  D   G+S+ FGFV +   E A++AI ++NG  L +R++
Sbjct:   48 AESTASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMW----SQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDD-MGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREV 210          

HSP 2 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 47/182 (25.82%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDEKQVQ 656
            ++++ N+HP + N  L + FS+ G +  CK+   D      +GFV Y    +A  AI  +NG  +  + + V    +   RE       +   N++V ++  E ++  L   F+ +   +   +  D + G+S+GFGFV++   E A  A+ +LN K +  ++I    A K     +E + Q
Sbjct:  141 NIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAE-GKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQ 321          

HSP 3 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 52/165 (31.52%), Postives = 83/165 (50.30%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGH--FNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLN 575
            ++YV NI  + +   L+++F+  G +    L K  +     +GFV+Y    +A  A+  LN + I GQ I V  A             Y +++ E  S +   N+F+ +L   +    L   F  F T + ARVM D+ TG+S+GFGFV F + E+A  AI ++N
Sbjct:  234 NIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTITSARVMVDE-TGKSKGFGFVCFSSPEEATKAITEMN 397          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 47/157 (29.94%), Postives = 83/157 (52.87%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            +V++ N+   + N  L + F++ G +  CK+ + +  +   YGFV Y    +A+ AI  +NG  +  + + V        R+       +   N++V +++PEVTD      F  +   + + +  DQ+TG+SRGFGFV+F + EDA  A+ +LN K
Sbjct:  150 NVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEK 306          

HSP 2 Score: 78.1814 bits (191), Expect = 4.745e-14
Identity = 47/160 (29.38%), Postives = 77/160 (48.12%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            S+YVG + P VT A+L E+FS  G +   ++    + +    Y +V+Y        A+  LN   I G+P ++ W+        T G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A  AI  +NG  L  +++
Sbjct:   62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRIMWSQRDPALRKT-GQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDEN-GNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKV 219          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 49/159 (30.82%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEG---CKLIKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            S+Y G++ P+VT A L ++F     +     C+   +    Y ++++ +   A  A+  LN   +F +PI++  +         SG  N+F+ +L   + +  LF  FS F T    +V  D  TGRS+G+GFV F  +E AQ+AI+ LNG  + ++Q+
Sbjct:   50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTR-LSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQV 206          

HSP 2 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 61/194 (31.44%), Postives = 87/194 (44.85%), Query Frame = 3
Query:   87 ILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL---IKKDKSSYGFVDYFDRRSAALAIVTLNG-----RHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE 644
            I+  N  P    S   ++++ N+   + N  L E FSS G +  CK+   +      YGFV +    SA  AI  LNG     + +F          A  +   T    NV+V +L  E+ +  L   F  F   S A VM DQ +G SR FGFV+F   E A SA+  +NG  LG+  +    A K +   +E
Sbjct:  121 IMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQ-SGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEE 313          

HSP 3 Score: 70.4774 bits (171), Expect = 9.894e-12
Identity = 51/184 (27.72%), Postives = 92/184 (50.00%), Query Frame = 3
Query:  108 PRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS----YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---------------SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            PRF      +VYV N+  ++    L++ F   G +    ++ +D+S     +GFV++    +AA A+  +NG  +    + V  A   S+RE+                S   N+++ +L   V D  L   FS +   + ++VM + + G SRGFGFV++ N E+A  A++++NGK +G + +
Sbjct:  226 PRFT-----NVYVKNLPKEIGEDELRKTFGKFGVISSA-VVMRDQSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPL 402          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: ELAV2_XENLA (ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.648e-16
Identity = 55/150 (36.67%), Postives = 80/150 (53.33%), Query Frame = 3
Query:  150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK-----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            N  PQ +T   L+ +F S G +E CKL++          YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++ DQ TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   71 NYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 217          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASPNC (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=pab1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.129e-15
Identity = 52/184 (28.26%), Postives = 91/184 (49.46%), Query Frame = 3
Query:   72 PQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            P++  + +    P  +     S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   34 PEVTAVENSTPAPAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 212          

HSP 2 Score: 76.2554 bits (186), Expect = 1.803e-13
Identity = 55/198 (27.78%), Postives = 99/198 (50.00%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ +L  E+ D      F  F   + A +  DQ+ G+SRGFGFV+F   E AQ+A+ ++N K + ++++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  143 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 339          
The following BLAST results are available for this feature:
BLAST of CX295688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
PABP_ASPTN3.882e-1629.57Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABPX_ARATH5.070e-1633.13Probable polyadenylate-binding protein At2g36660 O... [more]
PABP5_ARATH5.070e-1631.45Polyadenylate-binding protein 5 OS=Arabidopsis tha... [more]
PABP2_ARATH6.621e-1630.81Polyadenylate-binding protein 2 OS=Arabidopsis tha... [more]
ELAV2_XENTR6.621e-1636.91ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl... [more]
PABP_PICST8.648e-1631.55Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_MAGGR8.648e-1629.94Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP3_ARATH8.648e-1630.82Polyadenylate-binding protein 3 OS=Arabidopsis tha... [more]
ELAV2_XENLA8.648e-1636.67ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE... [more]
PABP_ASPNC1.129e-1528.26Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionC05074H02SK DroRLeaf1 Citrus clementina cDNA clone C05074H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295688 ID=CX295688; Name=CX295688; organism=Citrus clementina; type=EST; length=700bp
GAGGGGCTGAAGCACAAACAATGATGCAGCAGCAGTCTTTATACCAATAC
CATCCCAGTCTCTTAGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGAAA
TCTGCCTCCGCGATTTGATGCAAGTACATGCCGCAGCGTGTATGTTGGAA
ACATTCATCCTCAGGTTACAAATGCCCTGCTTCAAGAGGTTTTTTCAAGT
ACCGGTCCCCTTGAAGGATGCAAGCTCATTAAAAAAGATAAGTCATCCTA
TGGCTTTGTGGACTACTTTGATCGCAGATCAGCTGCCCTTGCAATTGTGA
CTCTTAATGGAAGGCACATATTTGGACAACCTATTAAAGTAAACTGGGCT
TATGCTAGCAGCCAGAGAGAGGACACATCAGGTCATTTCAACGTTTTTGT
TGGTGATCTTAGCCCTGAAGTTACAGATGCTACTTTGTTTGCGTGCTTCT
CTGTGTTTCCTACTTGTTCGGATGCAAGGGTTATGTGGGACCAAAAGACT
GGGCGTTCAAGGGGTTTTGGGTTTGTTTCTTTTCGGAATCAGGAGGATGC
CCAAAGTGCAATAAATGACTTAAATGGGAAGTGGCTTGGTAATAGACAGA
TTCGGTGCAACTGGGCTGCAAAAGGTGCTACCTCTGGTGATGAAAAGCAA
GTTCAGATTCCAAAGTGTTGTAGAGCTTACAATGGGATATCTGAAGATGG
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