CX295688

Overview
NameCX295688
Unique NameCX295688
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length700
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASPOR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus oryzae GN=pab1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/185 (29.19%), Postives = 92/185 (49.73%), Query Frame = 3
Query:   69 APQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            AP++  + S   P      +  S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   29 APEVTAVESTTAPNASQPHSA-SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 207          

HSP 2 Score: 75.485 bits (184), Expect = 3.076e-13
Identity = 54/198 (27.27%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ ++  +VT+      F  F   + A +  DQ+ G+SRGFGFV+F   E AQ+A++++N K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  138 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHESAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 334          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/158 (34.18%), Postives = 85/158 (53.80%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE---DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWL 587
            S+YVG++H  VT  LL   FS+ GP+   ++    + +    Y +V++     A  A+ T+N   I G+ I++ W    SQR+     SG  NVF+ +L   + + TL+  FS F     ++VM D +   S+G+ FV F+NQ  A  AI ++NGK L
Sbjct:   11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMW----SQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQ--GSKGYAFVHFQNQSAADRAIEEMNGKLL 162          

HSP 2 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 50/170 (29.41%), Postives = 86/170 (50.59%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS--YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQRE-----DTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623
            +V++ N+   + N  L E FS+ G +   K++  D+ S  Y FV + ++ +A  AI  +NG+ + G  + V        RE       S   NV++ +   ++ D  L   FS +      +VM D  +G+S+GFGFVSF + E A+ A+ ++NG+ +  + I    A K
Sbjct:   99 NVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDS-SGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQK 267          

HSP 3 Score: 70.8626 bits (172), Expect = 7.576e-12
Identity = 54/182 (29.67%), Postives = 87/182 (47.80%), Query Frame = 3
Query:  111 RFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKDKSS---YGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWA-------------YASSQREDTSGHFNV--FVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            R  AS   +VY+ N    + +  L++VFS  G     K++         +GFV +    +A  A+  +NGR I GQ I V  A             +   +RE   G   V  ++ +L   + D  L   FS F + S  +VM  Q+ G+S+GFG + F + EDA  A+ ++NG+ LG++ +
Sbjct:  183 RSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVM--QEEGQSKGFGLICFSSPEDATKAMTEMNGRILGSKPL 362          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: ELAV4_RAT (ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++ DQ TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   44 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 189          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: ELAV4_MOUSE (ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++ DQ TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   56 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 201          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: ELAV4_HUMAN (ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.927e-15
Identity = 54/149 (36.24%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  150 NIHPQ-VTNALLQEVFSSTGPLEGCKLIKK----DKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDTSGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGK 581
            N  PQ +T    + +F S G +E CKL++         YGFV+Y D + A  AI TLNG  +  + IKV++A  SS     +   N++V  L   +T   L   FS +     +R++ DQ TG SRG GF+ F  + +A+ AI  LNG+
Sbjct:   51 NYLPQNMTQEEFRSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDA---NLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQ 196          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 51/163 (31.29%), Postives = 85/163 (52.15%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E AQ+AI  +NG  L ++++
Sbjct:   56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMW----SQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKV 213          

HSP 2 Score: 73.559 bits (179), Expect = 1.169e-12
Identity = 53/198 (26.77%), Postives = 97/198 (48.99%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    A   R    E+   +F NV+V ++  + T+      F  F   + A +  D ++G+SRGFGFV+F + ++A +A+  LN K    +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  144 NVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVN 341          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASPFU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus fumigatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.516e-15
Identity = 54/188 (28.72%), Postives = 93/188 (49.47%), Query Frame = 3
Query:   66 AAPQIEPILSGN--LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            +AP++  + S +    P        S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   28 SAPEVTAVESASPSTTPSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 210          

HSP 2 Score: 77.411 bits (189), Expect = 8.094e-14
Identity = 55/198 (27.78%), Postives = 100/198 (50.51%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F NV++ ++  EVTD      F  F   + A +  DQ+ G+SRGFGFV+F   + AQ+A++++N K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  141 NVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQE-GKSRGFGFVNFSTHDSAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 337          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 52/168 (30.95%), Postives = 86/168 (51.19%), Query Frame = 3
Query:  120 ASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            + T  S+YVG ++P V  ALL E+FS  G +   ++    + K    Y +V++        AI  LN   I G+P ++ W    SQR+ +   +G  N+F+ +L P + +  L   F+ F      +V  D   G S+ FGFV +   E A++AI ++NG  L +R++
Sbjct:   47 SDTSASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMW----SQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDD-MGISKCFGFVHYETAEAAEAAIENVNGMLLNDREV 209          

HSP 2 Score: 72.7886 bits (177), Expect = 1.994e-12
Identity = 44/171 (25.73%), Postives = 82/171 (47.95%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAK 623
            ++++ N+HP + N  L + F++ G +  CK+   D      +GFV Y    +A  AI  +NG  +  + + V    +   RE       +   NV+  ++  + ++      F  +   +   +  D + G+S+GFGFV+F N E A  A+++LN K +  ++I    A K
Sbjct:  140 NIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHE-GKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQK 309          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_ASPCL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Aspergillus clavatus GN=pab1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.286e-15
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   66 AAPQIEPILSGN--LPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            +AP++  + S +   P   +     S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y +      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   27 SAPEVTAVESSSPTSPNNNNQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 209          

HSP 2 Score: 71.633 bits (174), Expect = 4.441e-12
Identity = 49/198 (24.75%), Postives = 98/198 (49.49%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT-----SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R+       +   N+++ ++ P+VT+      F  F   + A +  D + G+SRGFGFV++   E AQ+A+++++ K +  +++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  140 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPE-GKSRGFGFVNYSTHESAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVN 336          
BLAST of CX295688 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.292e-15
Identity = 55/190 (28.95%), Postives = 91/190 (47.89%), Query Frame = 3
Query:   54 PSLLAAPQIEPILSGNLPPRFDASTCRSVYVGNIHPQVTNALLQEVFSSTGPLEGCKL----IKKDKSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQREDT---SGHFNVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQI 602
            P    AP++  +     P         S+YVG + P VT A+L E+FSS G +   ++    + +    Y +V+Y D      A+  LN   I G+P ++ W    SQR+     +G  NVF+ +L   + +  L   F+ F      +V  D+  G S+G+GFV +   E A +AI  +NG  L ++++
Sbjct:   19 PDNAPAPEVTAV---EAPATTSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMW----SQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDE-FGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKV 200          

HSP 2 Score: 76.6406 bits (187), Expect = 1.381e-13
Identity = 54/198 (27.27%), Postives = 99/198 (50.00%), Query Frame = 3
Query:  135 SVYVGNIHPQVTNALLQEVFSSTGPLEGCKLIKKD---KSSYGFVDYFDRRSAALAIVTLNGRHIFGQPIKVNWAYASSQR----EDTSGHF-NVFVGDLSPEVTDATLFACFSVFPTCSDARVMWDQKTGRSRGFGFVSFRNQEDAQSAINDLNGKWLGNRQIRCNWAAKGATSGDE--KQVQIPKCCRA--YNGIS 692
            +V++ N+   + N  L + F++ G +  CK+ + +      YGFV Y    +A  AI  +NG  +  + + V    +   R    E+   +F N+++ ++ PEV D      F  F   + A +  D + G+SRGFGFV+F   E AQ+A+ ++N K + ++++    A K     +E  KQ +  +  +A  Y G++
Sbjct:  131 NVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVN 327          
The following BLAST results are available for this feature:
BLAST of CX295688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
PABP_ASPOR1.927e-1529.19Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PAB4L_HUMAN1.927e-1534.18Polyadenylate-binding protein 4-like OS=Homo sapie... [more]
ELAV4_RAT1.927e-1536.24ELAV-like protein 4 OS=Rattus norvegicus GN=Elavl4... [more]
ELAV4_MOUSE1.927e-1536.24ELAV-like protein 4 OS=Mus musculus GN=Elavl4 PE=1... [more]
ELAV4_HUMAN1.927e-1536.24ELAV-like protein 4 OS=Homo sapiens GN=ELAVL4 PE=1... [more]
PABP_COCIM2.516e-1531.29Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPFU2.516e-1528.72Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_DEBHA3.286e-1530.95Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_ASPCL3.286e-1528.72Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_EMENI4.292e-1528.95Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionC05074H02SK DroRLeaf1 Citrus clementina cDNA clone C05074H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295688 ID=CX295688; Name=CX295688; organism=Citrus clementina; type=EST; length=700bp
GAGGGGCTGAAGCACAAACAATGATGCAGCAGCAGTCTTTATACCAATAC
CATCCCAGTCTCTTAGCTGCTCCTCAGATAGAGCCTATCTTGAGTGGAAA
TCTGCCTCCGCGATTTGATGCAAGTACATGCCGCAGCGTGTATGTTGGAA
ACATTCATCCTCAGGTTACAAATGCCCTGCTTCAAGAGGTTTTTTCAAGT
ACCGGTCCCCTTGAAGGATGCAAGCTCATTAAAAAAGATAAGTCATCCTA
TGGCTTTGTGGACTACTTTGATCGCAGATCAGCTGCCCTTGCAATTGTGA
CTCTTAATGGAAGGCACATATTTGGACAACCTATTAAAGTAAACTGGGCT
TATGCTAGCAGCCAGAGAGAGGACACATCAGGTCATTTCAACGTTTTTGT
TGGTGATCTTAGCCCTGAAGTTACAGATGCTACTTTGTTTGCGTGCTTCT
CTGTGTTTCCTACTTGTTCGGATGCAAGGGTTATGTGGGACCAAAAGACT
GGGCGTTCAAGGGGTTTTGGGTTTGTTTCTTTTCGGAATCAGGAGGATGC
CCAAAGTGCAATAAATGACTTAAATGGGAAGTGGCTTGGTAATAGACAGA
TTCGGTGCAACTGGGCTGCAAAAGGTGCTACCTCTGGTGATGAAAAGCAA
GTTCAGATTCCAAAGTGTTGTAGAGCTTACAATGGGATATCTGAAGATGG
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