CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_SCHPO (40 kDa peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=wis2 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.382e-29
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = 2
Query:  341 YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG----YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            YF +SI    GK+   I   L+ + VP+T +NF +LC G +  G    YKGS FHRVIK+FM+Q             SIYG  F+DENF+L H  P ++SMANAGPNTNGSQFFI TV TP LD +HVVFG+V
Sbjct:    6 YFKISID---GKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGKV 135          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIG_RAT (Peptidyl-prolyl cis-trans isomerase G OS=Rattus norvegicus GN=Ppig PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29
Identity = 69/139 (49.64%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +FD++I N   + AGR+V  L+ D  P+T ENFR LCTGEKG G        YK   FHRV+KDFM+Q             SIYG  F+DE+F + H    ++SMAN G +TNGSQFFI T  TP LD  HVVFGQV
Sbjct:    9 RCFFDIAINN---QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQV 144          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIG_MOUSE (Peptidyl-prolyl cis-trans isomerase G OS=Mus musculus GN=Ppig PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29
Identity = 69/139 (49.64%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +FD++I N   + AGR+V  L+ D  P+T ENFR LCTGEKG G        YK   FHRV+KDFM+Q             SIYG  F+DE+F + H    ++SMAN G +TNGSQFFI T  TP LD  HVVFGQV
Sbjct:    9 RCFFDIAINN---QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQV 144          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIG_HUMAN (Peptidyl-prolyl cis-trans isomerase G OS=Homo sapiens GN=PPIG PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.417e-29
Identity = 69/139 (49.64%), Postives = 85/139 (61.15%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +FD++I N   + AGR+V  L+ D  P+T ENFR LCTGEKG G        YK   FHRV+KDFM+Q             SIYG  F+DE+F + H    ++SMAN G +TNGSQFFI T  TP LD  HVVFGQV
Sbjct:    9 RCFFDIAINN---QPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQV 144          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28
Identity = 70/137 (51.09%), Postives = 87/137 (63.50%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE------KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYG-RTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+ D++I    G+L GRI I L+   VP+TAENFR  CTGE      K  GYK STFHR+I+ FMIQ             +I+  RTF DENF L H  PG++SMANAG ++NG QFFI TV   +LD +HVVFG+V
Sbjct:    7 VFMDIAID---GRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEV 140          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.739e-28
Identity = 67/139 (48.20%), Postives = 83/139 (59.71%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+ D+S+      L GRI I L+ +D P+T ENFRALCTGE G          YK + FHR++K FMIQ             SIYGR F DE FKL H  P ++SMAN GPN+N SQFFI T   P  + +HVVFG+V
Sbjct:    6 RVFLDISVDE---NLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEV 141          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28
Identity = 71/136 (52.21%), Postives = 84/136 (61.76%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGF-GYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTV-KTPWLDQRHVVFGQV 727
            +T KV+FD+  G    +  GRIVIGLYG   P+TA+NF  L T      G+ GSTFHRVI +FM+Q             SIYG TF DENF L H   G +SMAN G +TNGSQFFI T  +  WLD +HVVFGQV
Sbjct:   34 ITQKVFFDIEHGE---EKVGRIVIGLYGKVCPKTAKNFYKLSTTTNSKKGFIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQV 166          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.051e-27
Identity = 66/144 (45.83%), Postives = 83/144 (57.64%), Query Frame = 2
Query:  320 SKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            S +  +V+ D+++     K  GRI I L+  + P+T ENFRALCTGE G          YKG+  HRV+K FMIQ             SIYGR F DE F L H  P ++SMAN GPN+N SQFFI T   P  + +HVVFG+V
Sbjct:    2 SSLEKRVFLDMALDE---KPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEV 142          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 2
Query:  380 AGRIVIGLYGDDVPETAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            AGR+   L+ D VP T+ENFR LCTGE        GYK S FHR+IKDFM Q             SIYG  F DENF L H   G++SMAN+GP TNG QFFI     P+LD +HVVFG+V
Sbjct:    3 AGRLKCELFSDIVPRTSENFRQLCTGEFRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKV 123          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: NKTR_MOUSE (NK-tumor recognition protein OS=Mus musculus GN=Nktr PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 9.209e-27
Identity = 68/137 (49.64%), Postives = 81/137 (59.12%), Query Frame = 2
Query:  341 YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +FD+ I     +  GRI+  L+ D  P+T +NF  LC+GEKG G        YKGSTFHRV+K+FMIQ             SIYG  FKDENF L H    ++SMAN G +TNGSQFFI T   P LD  HVVFG V
Sbjct:   10 HFDIEINR---EPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLV 143          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPID_SCHPO3.382e-2952.6340 kDa peptidyl-prolyl cis-trans isomerase OS=Schi... [more]
PPIG_RAT4.417e-2949.64Peptidyl-prolyl cis-trans isomerase G OS=Rattus no... [more]
PPIG_MOUSE4.417e-2949.64Peptidyl-prolyl cis-trans isomerase G OS=Mus muscu... [more]
PPIG_HUMAN4.417e-2949.64Peptidyl-prolyl cis-trans isomerase G OS=Homo sapi... [more]
PPIH_SCHPO1.678e-2851.09Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
CYP9_CAEEL3.739e-2848.20Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
CYPB_YEAST4.883e-2852.21Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
CYP9_CAEBR7.051e-2745.83Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIH_USTMA9.209e-2752.89Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
NKTR_MOUSE9.209e-2749.64NK-tumor recognition protein OS=Mus musculus GN=Nk... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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