CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.760e-42
Identity = 85/130 (65.38%), Postives = 93/130 (71.54%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VY DV      G+  GR+V+ L  D VP+TAENFRALCTGEKGFGYKGSTFHRVI  FM Q             SIYG  F DENF L H+GPGV+SMANAGPNTNGSQFFICT+KT WLD +HVVFG V
Sbjct:   47 VYLDVGAD---GQPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHV 173          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.760e-42
Identity = 89/153 (58.17%), Postives = 105/153 (68.63%), Query Frame = 2
Query:  269 MGTRSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +G   L  A    A    K+T+KVYFD++ G+   +  GR+V+GLYG  VPET ENFRAL TGEKGFGY+GS FHRVIK+FMIQ             SIYG  FKDENFKL H   G++SMANAG +TNGSQFFI TV T WLD +HVVFG+V
Sbjct:   14 LGLGLLFLAQTAEAAKGPKITHKVYFDITQGD---QPLGRVVMGLYGKTVPETTENFRALATGEKGFGYEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEV 163          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 170.629 bits (431), Expect = 7.760e-42
Identity = 88/135 (65.19%), Postives = 98/135 (72.59%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVT KVYFD+ IG+   +  GR+VIGL+G  VP+T +NF AL TGEKGFGYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG VSMANAG +TNGSQFFI TVKT WLD +HVVFG+V
Sbjct:   41 KVTVKVYFDLRIGD---EDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKV 172          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_DICDI (Peptidyl-prolyl cis-trans isomerase B OS=Dictyostelium discoideum GN=cypB PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41
Identity = 87/142 (61.27%), Postives = 98/142 (69.01%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K+TNKV+FD+ I N   K AGRIV GLYG  VP+T ENFRALCTGEKG G       YK S FHR+I +FMIQ             SIYG+ F DENFK+ H  PG++SMANAGPNTNGSQFFI TV T WLD RH VFG+V
Sbjct:   27 KITNKVFFDIEIDN---KPAGRIVFGLYGKTVPKTVENFRALCTGEKGLGTSGKPLHYKDSKFHRIIPNFMIQGGDFTRGDGTGGESIYGKKFNDENFKIKHSKPGLLSMANAGPNTNGSQFFITTVVTSWLDGRHTVFGEV 165          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41
Identity = 86/135 (63.70%), Postives = 97/135 (71.85%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVT KVYFD+ IG+   +  GR++ GL+G  VP+T +NF AL TGEKGFGYK S FHRVIKDFMIQ             SIYG  F DENFKL H GPG VSMANAG +TNGSQFFI TVKT WLD +HVVFG+V
Sbjct:   41 KVTVKVYFDLRIGD---EDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKV 172          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP1_CAEEL (Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhabditis elegans GN=cyn-1 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41
Identity = 87/138 (63.04%), Postives = 97/138 (70.29%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FDVSIG    + AGR+ + L+ D VP+TAENFRALCTGEKG G       +KGS FHR+I +FMIQ             SIYG  FKDENF L H GPG +SMANAGPNTNGSQFFICTV TPWLD  HVVFGQV
Sbjct:   23 KVFFDVSIGE---EPAGRVTMELFNDVVPKTAENFRALCTGEKGVGEQGVALHFKGSKFHRIIPEFMIQGGDFTRHNGTGGESIYGNKFKDENFDLKHTGPGCLSMANAGPNTNGSQFFICTVDTPWLDGGHVVFGQV 157          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.258e-41
Identity = 87/138 (63.04%), Postives = 96/138 (69.57%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVYFD+++G   GK AGRIV+ LY D  PETAENFRALCTGE+G G       YKGS+FHRVI  FM Q             SIYG  FKDENF   H GPG++SMANAG NTNGSQFFICT KT WLD +HVVFGQV
Sbjct:    6 KVYFDMTVG---GKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQV 140          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41
Identity = 85/132 (64.39%), Postives = 94/132 (71.21%), Query Frame = 2
Query:  332 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            ++VY D+ IGN    LAGRI I L GD VP+TAENFRALCTGE GFGYK S+FHR+I  FM Q             SIYG  F+DENF L H GPG +SMANAG NTNGSQFFICT KT WLD +HVVFGQV
Sbjct:  155 SRVYLDIQIGNT---LAGRIEIELRGDVVPKTAENFRALCTGEAGFGYKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQV 283          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIC_HUMAN (Peptidyl-prolyl cis-trans isomerase C OS=Homo sapiens GN=PPIC PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41
Identity = 88/134 (65.67%), Postives = 96/134 (71.64%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VT KV+FDV IG+   K  GRIVIGL+G  VP+T ENF AL TGEKG+GYKGS FHRVIKDFMIQ             SIYG TF DENFKL H G G VSMANAGP+TNGSQFFI   K  WLD +HVVFG+V
Sbjct:   36 VTAKVFFDVRIGD---KDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKV 166          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIC_BOVIN (Peptidyl-prolyl cis-trans isomerase C OS=Bos taurus GN=PPIC PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.851e-41
Identity = 88/134 (65.67%), Postives = 96/134 (71.64%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VT KV+FDV IG+   K  GRIVIGL+G  VP+T ENF AL TGEKG+GYKGS FHRVIKDFMIQ             SIYG TF DENFKL H G G VSMANAGP+TNGSQFFI   K  WLD +HVVFG+V
Sbjct:   36 VTAKVFFDVRIGD---KDVGRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDFTRGDGTGGISIYGETFPDENFKLKHYGIGWVSMANAGPDTNGSQFFITLTKPTWLDGKHVVFGKV 166          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIF_MOUSE7.760e-4265.38Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_GIBZE7.760e-4258.17Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPIB_BOVIN7.760e-4265.19Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB_DICDI1.013e-4161.27Peptidyl-prolyl cis-trans isomerase B OS=Dictyoste... [more]
PPIB_HUMAN1.729e-4163.70Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
CYP1_CAEEL1.729e-4163.04Peptidyl-prolyl cis-trans isomerase 1 OS=Caenorhab... [more]
CP19A_ARATH2.258e-4163.04Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
PPIE_RHIOR3.851e-4164.39Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIC_HUMAN3.851e-4165.67Peptidyl-prolyl cis-trans isomerase C OS=Homo sapi... [more]
PPIC_BOVIN3.851e-4165.67Peptidyl-prolyl cis-trans isomerase C OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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