CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLE (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates leucogenys GN=PPIA PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_HYLLA (Peptidyl-prolyl cis-trans isomerase A OS=Hylobates lar GN=PPIA PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_HUMAN (Peptidyl-prolyl cis-trans isomerase A OS=Homo sapiens GN=PPIA PE=1 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_GORGO (Peptidyl-prolyl cis-trans isomerase A OS=Gorilla gorilla gorilla GN=PPIA PE=3 SV=3)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_CERAE (Peptidyl-prolyl cis-trans isomerase A OS=Cercopithecus aethiops GN=PPIA PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP2_CAEEL (Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhabditis elegans GN=cyn-2 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40
Identity = 84/138 (60.87%), Postives = 97/138 (70.29%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD++IG   GK  GRIV+ LY D VP+TAENFRALCTGEKG G       +KGS FHR+I +FMIQ             SI+G  F DENFK  H GPGV+SMAN G NTNGSQFF+CTVKT WLD +HVVFG+V
Sbjct:    5 KVFFDITIG---GKKGGRIVMELYNDIVPKTAENFRALCTGEKGKGKSGKKLHFKGSKFHRIIPEFMIQGGDFTEGNGTGGESIHGEKFDDENFKEKHTGPGVLSMANCGANTNGSQFFLCTVKTTWLDGKHVVFGKV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_RAT (Peptidyl-prolyl cis-trans isomerase A OS=Rattus norvegicus GN=Ppia PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 7.263e-40
Identity = 80/134 (59.70%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD++     G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS+FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDITAD---GEPLGRVCFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 7.263e-40
Identity = 84/138 (60.87%), Postives = 98/138 (71.01%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD++IG   G  AG+IV+ LY D  P+TAENFRALCTGEKG G       +KGS+FHRVI +FM Q             SIYG  F+DENF+  H GPG++SMANAG NTNGSQFFICTVKT WLD +HVVFGQV
Sbjct:    6 KVFFDMTIG---GAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQV 140          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_PIG (Peptidyl-prolyl cis-trans isomerase A OS=Sus scrofa GN=PPIA PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.486e-40
Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 9.486e-40
Identity = 80/134 (59.70%), Postives = 93/134 (69.40%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDIAVD---GEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIA_HYLLE5.561e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HYLLA5.561e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Hylobates... [more]
PPIA_HUMAN5.561e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Homo sapi... [more]
PPIA_GORGO5.561e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Gorilla g... [more]
PPIA_CERAE5.561e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Cercopith... [more]
CYP2_CAEEL5.561e-4060.87Peptidyl-prolyl cis-trans isomerase 2 OS=Caenorhab... [more]
PPIA_RAT7.263e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Rattus no... [more]
CP19B_ARATH7.263e-4060.87Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
PPIA_PIG9.486e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Sus scrof... [more]
PPIA_BOVIN9.486e-4059.70Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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