CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 9.486e-40
Identity = 85/138 (61.59%), Postives = 96/138 (69.57%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVYFD++I    G+ AGRIV+ LY D  P TAENFRALCTGEKG G       +KGS FHRVI +FM Q             SIYG  F+DENF+  H GPG++SMANAG NTNGSQFFICTVKT WLD +HVVFGQV
Sbjct:    5 KVYFDMTID---GQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 163.31 bits (412), Expect = 1.239e-39
Identity = 79/130 (60.77%), Postives = 91/130 (70.00%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FD+++    G+  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS FHR+I  FM Q             SIYG  F DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG V
Sbjct:    6 VFFDIAVD---GEPLGRVSFDLFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39
Identity = 84/138 (60.87%), Postives = 96/138 (69.57%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD+++G   G  AGRIV+ LY ++VP+TAENFRALCTGEKG G       YKGSTFHRVI +FM Q             SIYG  F DE F      PGV+SMANAGPNTNGSQFFICTV TPWLD +HVVFGQV
Sbjct:    5 RVFFDMTVG---GAPAGRIVMELYANEVPKTAENFRALCTGEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB2_RHIOR (Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus oryzae GN=cyp9 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39
Identity = 80/134 (59.70%), Postives = 95/134 (70.90%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +T+K+YFD+  G    +  GRIV GLYG  VP+TAENF+ L TG+ G+GYKGSTFHRVI  FMIQ             SIYG  F DENFKL H  PG++SMANAGP++NGSQFFI TV T WLD +HVVFG+V
Sbjct:   32 ITDKIYFDIKQGE---ESLGRIVFGLYGKTVPKTAENFKQLATGQNGYGYKGSTFHRVIDQFMIQGGDFTNHDGTGGKSIYGSRFPDENFKLRHTVPGLLSMANAGPDSNGSQFFITTVVTSWLDGKHVVFGKV 162          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA2_RHIOR (Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39
Identity = 83/133 (62.41%), Postives = 94/133 (70.68%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVWRH 736
            VYFD+SI    GK AGRI   L+ D VP+TA+NFRALCTGE+GFGYKGS FHRVI  FM+Q             SIYG  F DENFKL H  PG++SMANAGPNTNGSQFFI TV   WLD  HVVFG+V ++
Sbjct:    3 VYFDISID---GKPAGRIEFQLFEDVVPKTAKNFRALCTGEQGFGYKGSKFHRVIPQFMLQGGDFTRGDGTGGKSIYGEKFADENFKLKHSEPGLLSMANAGPNTNGSQFFITTVPCSWLDGAHVVFGKVTKN 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.760e-39
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD++IG   G  AGR+V+ L+ D  P+TAENFRALCTGEKG G       YKGSTFHRVI  FM Q             SIYG  F DENF   H GPG++SMANAGP TNGSQFFICT KT WL+ +HVVFGQV
Sbjct:    5 KVFFDLTIG---GAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39
Identity = 85/139 (61.15%), Postives = 98/139 (70.50%), Query Frame = 2
Query:  332 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            ++V+FD++IG   GK AGRIV  LY D VP+TAENFRALCTGEKG G       YKGSTFHRVIK FMIQ             SIYG  F+DENF+L H  P ++SMANAGP TNGSQFF+ TV TP LD +HVVFG+V
Sbjct:   12 SRVFFDITIG---GKAAGRIVFELYNDIVPKTAENFRALCTGEKGVGKLGKPLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_STRCH (Peptidyl-prolyl cis-trans isomerase A OS=Streptomyces chrysomallus GN=ppiA PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39
Identity = 82/134 (61.19%), Postives = 95/134 (70.90%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +T KVYFD++I +     AGRI   L+ D VP+TAENFRAL TGEKGFGY GS+FHRVI DFM+Q             SIYG  F DENF+L H   G++SMANAG NTNGSQFFI TV TPWLD +HVVFG+V
Sbjct:    1 MTTKVYFDITIDDAP---AGRITFNLFDDVVPKTAENFRALATGEKGFGYAGSSFHRVITDFMLQGGDFTRGDGTGGKSIYGEKFADENFQLKHDRVGLLSMANAGKNTNGSQFFITTVLTPWLDGKHVVFGEV 131          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39
Identity = 79/134 (58.96%), Postives = 94/134 (70.15%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V   V+FD++  +   +  GR+   L+ D VP+TAENFRAL TGEKGFGYKGS+FHR+I  FM Q             SIYG  F+DENF L H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    2 VNPTVFFDITADD---EPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39
Identity = 85/135 (62.96%), Postives = 93/135 (68.89%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVT+KVYFD+ IG   GK  GRIVIGL+G  VP+TA NF  L    KG GY GS FHRVI DFMIQ             SIYG  F DENFKL H G G +SMANAG +TNGSQFFI TVKTPWLD RHVVFG++
Sbjct:   26 KVTDKVYFDMEIG---GKPIGRIVIGLFGKTVPKTATNFIELAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKI 157          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CP18C_ARATH9.486e-4061.59Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
PPIA_FELCA1.239e-3960.77Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
CYPH_MAIZE1.618e-3960.87Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]
PPIB2_RHIOR2.113e-3959.70Peptidyl-prolyl cis-trans isomerase B2 OS=Rhizopus... [more]
PPIA2_RHIOR2.113e-3962.41Peptidyl-prolyl cis-trans isomerase A2 OS=Rhizopus... [more]
CYPH_SOLLC2.760e-3960.14Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
PPID_NEUCR3.605e-3961.1541 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]
PPIA_STRCH3.605e-3961.19Peptidyl-prolyl cis-trans isomerase A OS=Streptomy... [more]
PPIA_MOUSE3.605e-3958.96Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
CYP5_CAEEL3.605e-3962.96Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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