CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.708e-39
Identity = 83/138 (60.14%), Postives = 94/138 (68.12%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD+S+G   G+ AGRIV+ L+ D  P TAENFRALCTGEKG G       YK S+FHRVI  FM Q             SIYG  F DENF   H GPG++SMANAGPNTNGSQFFICT KT WLD +HVVFGQV
Sbjct:    5 RVFFDMSVG---GQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.030e-39
Identity = 82/130 (63.08%), Postives = 90/130 (69.23%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            VYFDVS     G+  G+I   LY D VP+TAENFRALCTGEKGFGYKGS FHRVI  FM+Q             SIYG  F DENF   H  PG++SMANAGPNTNGSQFFI TV  PWLD +HVVFG+V
Sbjct:    4 VYFDVSAD---GQKLGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEV 130          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPC_YEAST (Peptidyl-prolyl cis-trans isomerase C, mitochondrial OS=Saccharomyces cerevisiae GN=CPR3 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.370e-38
Identity = 83/153 (54.25%), Postives = 101/153 (66.01%), Query Frame = 2
Query:  269 MGTRSLVRASAEVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            M  RS+++ S   ++  S++  KV+FD ++    G   GRI   LY + VP+TAENFRALCTGEKG+GYKG  FHR+I DFMIQ             SIYG  F DENF   H   G++SMANAGPNTNGSQFFI TV  PWLD +HVVFG+V
Sbjct:    1 MFKRSIIQQSRLFSNSASRLGKKVFFDPAVN---GTKIGRIEFELYDNVVPKTAENFRALCTGEKGWGYKGVPFHRIIPDFMIQGGDTDLTNGFGGKSIYGSKFADENFVKKHDKAGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEV 150          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.789e-38
Identity = 82/137 (59.85%), Postives = 93/137 (67.88%), Query Frame = 2
Query:  317 QSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            Q +   +V+FD+ IGN     AGRIV+ L  D VP TAENFRALCTGE+GFGY    FHRVI  FM Q             SIYGR F DENF+L H G GV+SMAN+GPNTNGSQFFICT K  WLD +HVVFG+V
Sbjct:  107 QKRNLPRVFFDIRIGNGD---AGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRV 240          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_HEMPU (Peptidyl-prolyl cis-trans isomerase OS=Hemicentrotus pulcherrimus PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 81/131 (61.83%), Postives = 90/131 (68.70%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD+      G+  GRIV+ L  D VP+TAENFRALCTGEKGFGYKGSTFHRVI  FM Q             SIYG  F DENF L H  PG++SMANAG NTNGSQFFICT  T WLD +HVVFG V
Sbjct:    5 QVFFDLQAN---GENLGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPGFMCQGGDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDGKHVVFGAV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe GN=ppi1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 82/129 (63.57%), Postives = 92/129 (71.32%), Query Frame = 2
Query:  341 YFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +FDV I N  G+  GRIV  L+ D VP+TA NFRALCTGEKG+GY GSTFHRVI  FM+Q             SIYG  F DENF L H  PG++SMANAGPNTNGSQFFI TV TPWLD +HVVFG+V
Sbjct:    5 FFDV-IAN--GQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKHVVFGEV 130          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 85/139 (61.15%), Postives = 94/139 (67.63%), Query Frame = 2
Query:  335 KVYFDVSI-GNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD++I GNP    AGRIV+ LY D  P TAENFRALCTGEKG G       YKGSTFHRVI +FM Q             SIYG  F DENF   H GPG++SMANAG  TNGSQFFICT KT WLD +HVVFG+V
Sbjct:    5 KVFFDMAIAGNP----AGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38
Identity = 80/138 (57.97%), Postives = 92/138 (66.67%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KV+FD+ IG      AGR+V+ L+ D  P TA NFRALCTGE G G       YKGS FHR+I  FM Q             SIYG  F+DENFKL H GPG++SMAN+GPNTNGSQFFICT KT WLD +HVVFG+V
Sbjct:    5 KVFFDILIGK---MKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVFGKV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.160e-37
Identity = 80/137 (58.39%), Postives = 92/137 (67.15%), Query Frame = 2
Query:  317 QSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            Q +   +V+FD+ IGN      GRIV+ L  D VP TAENFRALCTG++GFGY    FHRVI  FM Q             SIYGR F DENF+L H G GV+SMAN+GPNTNGSQFFICT K  WLD +HVVFG+V
Sbjct:   13 QKRNLPRVFFDIRIGNAD---RGRIVMELRSDIVPRTAENFRALCTGDRGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRV 146          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_ECHGR (Peptidyl-prolyl cis-trans isomerase OS=Echinococcus granulosus GN=CYP-1 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.160e-37
Identity = 81/131 (61.83%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            K +FD+SIG   GK AGRIV  L+ DDVP+T ENFRALCTGEKGFGYKGS FHR+I  FM Q             SIYG  F+DENF   H  P ++SMANAG NTNGSQFFI T  T WLD +HVVFG+V
Sbjct:    4 KCFFDISIG---GKPAGRIVFALF-DDVPKTVENFRALCTGEKGFGYKGSKFHRIIPGFMCQGGDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDGKHVVFGEV 130          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
CYPH_CATRO4.708e-3960.14Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
PPIA_CANAL8.030e-3963.08Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CYPC_YEAST1.370e-3854.25Peptidyl-prolyl cis-trans isomerase C, mitochondri... [more]
PPIE_SCHMA1.789e-3859.85Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPIA_HEMPU2.336e-3861.83Peptidyl-prolyl cis-trans isomerase OS=Hemicentrot... [more]
CYPH_SCHPO2.336e-3863.57Peptidyl-prolyl cis-trans isomerase OS=Schizosacch... [more]
CYPH_LUPLU2.336e-3861.15Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CP19C_ARATH2.336e-3857.97Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Ara... [more]
PPIE_SCHJA1.160e-3758.39Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PPIA_ECHGR1.160e-3761.83Peptidyl-prolyl cis-trans isomerase OS=Echinococcu... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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