CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1819 contig Ccv1_Contig1819:5..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_PONAB (Peptidyl-prolyl cis-trans isomerase E OS=Pongo abelii GN=PPIE PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.514e-37
Identity = 80/142 (56.34%), Postives = 96/142 (67.61%), Query Frame = 2
Query:  302 EVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            E A  +++   +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG+V
Sbjct:  130 EPAAKKARSNPQVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV 268          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_DICDI (Peptidyl-prolyl cis-trans isomerase A OS=Dictyostelium discoideum GN=ppiA PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.978e-37
Identity = 80/138 (57.97%), Postives = 93/138 (67.39%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD++IG   G  AG++V+ LY + VP+TAENFRALCTGEKG G       YKGS+FHRVI +FM Q             SIYG  F DENFKL H G G +SMANAG NTNGSQFFIC   T WLD +HVVFG V
Sbjct:   13 RVFFDITIG---GVEAGKVVMELYANTVPKTAENFRALCTGEKGIGKSGKPLSYKGSSFHRVITNFMCQGGDFTMGNGTGGESIYGNKFADENFKLKHFGQGTLSMANAGANTNGSQFFICVAPTDWLDGKHVVFGFV 147          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.583e-37
Identity = 79/142 (55.63%), Postives = 96/142 (67.61%), Query Frame = 2
Query:  302 EVADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            E A  +++   +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG++
Sbjct:  130 EPAVKKARSNPQVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEI 268          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37
Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG+V
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV 268          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_HUMAN (Peptidyl-prolyl cis-trans isomerase E OS=Homo sapiens GN=PPIE PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37
Identity = 78/131 (59.54%), Postives = 91/131 (69.47%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +VY D+ IGN   K AGRI + L  D VP TAENFR LCT EKGFG+KGS+FHR+I  FM Q             SIYG+ F DENF L H GPG++SMAN+GPNTNGSQFF+   KT WLD +HVVFG+V
Sbjct:  141 QVYMDIKIGN---KPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEV 268          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37
Identity = 84/147 (57.14%), Postives = 96/147 (65.31%), Query Frame = 2
Query:  308 ADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            A+  S    +VYFD+SIG   GK  GRI + LY D VP+TA+NFR+LCTGEKG G       YKGS FHRVIK FMIQ             SIYG  F DE F + H  P ++SMANAGPNTNGSQFFI TV TP LD +HVVFG+V
Sbjct:    3 AEGDSPARPRVYFDISIG---GKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEV 146          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.406e-37
Identity = 80/145 (55.17%), Postives = 95/145 (65.52%), Query Frame = 2
Query:  314 LQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +K   KV+FD+++    G+ +GR+   L+ D VP+TAENFRALCTGEKG G       YK S FHR+I  FM Q             SIYGRTFKDENF L H G G++SMANAGPNTNGSQFFI  V TPWLD  H VFGQ+
Sbjct:    1 MAAKNLPKVFFDIAVN---GQHSGRMTFKLFSDTVPKTAENFRALCTGEKGKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQI 142          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.755e-37
Identity = 77/147 (52.38%), Postives = 94/147 (63.95%), Query Frame = 2
Query:  320 SKVTNKVYFDVSIGNPV-----------GKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            S + +KV+FD+    PV              +GRI   LY D VP+TA NF+ LCTG+ GFGYKGS+FHR+I +FM+Q             SIYG  F DENF   H+ PG++SMANAGPNTNGSQFF+ TV T WLD RHVVFG+V
Sbjct:   41 SSIMSKVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFGYKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEV 187          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP5_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizopus oryzae GN=cyp5 PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 5.755e-37
Identity = 81/145 (55.86%), Postives = 93/145 (64.14%), Query Frame = 2
Query:  314 LQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            + +K   KV+FDV++    GK +GR+   L+ D VP+TAENFRALCTGEKG G       YKGS FHR+I  FM Q             SIYG  F DENF L H G GV+SMANAGPNTNGSQFFI   KTPWLD  H VFGQ+
Sbjct:    1 MAAKNLPKVFFDVAVN---GKPSGRLTFKLFSDTVPKTAENFRALCTGEKGTGVSGKPLHYKGSHFHRIIPGFMAQGGDFTMGNGRGGESIYGHKFNDENFTLKHTGKGVLSMANAGPNTNGSQFFITFDKTPWLDGNHTVFGQL 142          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIE_DROME (Peptidyl-prolyl cis-trans isomerase E OS=Drosophila melanogaster GN=cyp33 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.516e-37
Identity = 79/141 (56.03%), Postives = 93/141 (65.96%), Query Frame = 2
Query:  305 VADLQSKVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V +   K   +V+FD+ IG   G  AGRIV+ L  D VP+TAENFR LCT E+G+GYKG +FHRVI +FM Q             SIYG+ F DENF L H   G +SMAN+G NTNGSQFFICT KT WLD +HVVFG V
Sbjct:  130 VIEKAEKRNPQVFFDIRIG---GNDAGRIVMLLRADVVPKTAENFRQLCTHEQGYGYKGCSFHRVIPEFMCQGGDFTNNNGTGGKSIYGKKFNDENFNLKHNSFGTLSMANSGANTNGSQFFICTTKTDWLDNKHVVFGHV 267          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPIE_PONAB1.514e-3756.34Peptidyl-prolyl cis-trans isomerase E OS=Pongo abe... [more]
PPIA_DICDI1.978e-3757.97Peptidyl-prolyl cis-trans isomerase A OS=Dictyoste... [more]
PPIE_BOVIN2.583e-3755.63Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPIE_MOUSE3.374e-3759.54Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_HUMAN3.374e-3759.54Peptidyl-prolyl cis-trans isomerase E OS=Homo sapi... [more]
PPID_GIBZE3.374e-3757.14Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYP6_RHIOR4.406e-3755.17Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
CYPH_NEUCR5.755e-3752.38Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
CYP5_RHIOR5.755e-3755.86Peptidyl-prolyl cis-trans isomerase cyp5 OS=Rhizop... [more]
PPIE_DROME7.516e-3756.03Peptidyl-prolyl cis-trans isomerase E OS=Drosophil... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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