CX295696

Overview
NameCX295696
Unique NameCX295696
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length740
Libraries
Library NameType
DroRLeaf1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36
Identity = 79/139 (56.83%), Postives = 95/139 (68.35%), Query Frame = 2
Query:  332 NKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +KV+FD++IG+     AGRIV+ L+ +  P+TAENFRALCTGEKG G       +KGS FHRVI DFM Q             SIYG  F DENF+L H  PG++SMANAGPNTNGSQFF+  V  PWLD +HVVFG+V
Sbjct:    3 SKVFFDITIGSDT---AGRIVMELFDEVTPKTAENFRALCTGEKGVGKAGKPLHFKGSHFHRVITDFMAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTFVPCPWLDGKHVVFGEV 138          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.187e-36
Identity = 82/138 (59.42%), Postives = 95/138 (68.84%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +VYFD++IGN   K  GRIV  L+ D VP+TAENFRALCTGEKG G       Y+GS FHR+IK+FMIQ             SIYG  F+DENF L H  P ++SMANAGP TNGSQFFI TV TP LD +HVVFG+V
Sbjct:    5 RVYFDITIGN---KPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.187e-36
Identity = 80/140 (57.14%), Postives = 94/140 (67.14%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVT+KV+FD+ +    GK   RI+IGL+G  VP+T ENF+ L  G      +   YKGSTFHRVIK FMIQ             SIYG  F DENFKL H+G G +SMANAGP+TNGSQFFI TVKT WLD +HVVFG+V
Sbjct:   29 KVTDKVFFDIEVD---GKPLARIIIGLFGKTVPKTVENFKQLSIGTQLKDGRTASYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKV 165          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.187e-36
Identity = 75/134 (55.97%), Postives = 89/134 (66.42%), Query Frame = 2
Query:  326 VTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V + ++FD+++    GK  GRI I  + D +P+TAENFRAL TGEKGF YKGS FHR+I  FM Q             SIYG  F DEN    H G G++SMANAGPNTNGSQFFICT KT WLD +HV FG+V
Sbjct:    2 VNSVIFFDITVD---GKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKV 132          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.187e-36
Identity = 80/139 (57.55%), Postives = 92/139 (66.19%), Query Frame = 2
Query:  335 KVYFDVSI-GNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG-------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FD+S+ G P+G    RI + L+ D  P TAENFRALCTGEKG G       +KGS FHRVI  FM Q             SIYG  FKDENF   H G G++SMAN+GPNTNGSQFFICT KT WLD +HVVFGQV
Sbjct:    5 RVFFDMSLSGTPIG----RIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQV 139          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.730e-36
Identity = 81/139 (58.27%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FDV IG   G+  GRIV+ L+ D VP+TAENFRALCTGEKG G        +KG  FHR+IK FMIQ             SIYG  F+DENF   H   G++SMANAGPNTNGSQFFI TV TP LD +HVVFGQV
Sbjct:   17 RVFFDVDIG---GERVGRIVLELFADIVPKTAENFRALCTGEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQV 152          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 151.754 bits (382), Expect = 3.730e-36
Identity = 81/139 (58.27%), Postives = 93/139 (66.91%), Query Frame = 2
Query:  335 KVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFG--------YKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +V+FDV IG   G+  GRIV+ L+ D VP+TAENFRALCTGEKG G        +KG  FHR+IK FMIQ             SIYG  F+DENF   H   G++SMANAGPNTNGSQFFI TV TP LD +HVVFGQV
Sbjct:   17 RVFFDVDIG---GERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQV 152          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: CYP6_CAEEL (Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhabditis elegans GN=cyn-6 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.730e-36
Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            +VT+KV+FD+ IG   G+  G+IVIGL+G+ VP+T +NF  L    +G GY GS FHRVI++FMIQ             SIYG  F+DENFKL H GPG +SMANAG +TNGSQFFI T KT WLD +HVVFG++
Sbjct:   23 RVTDKVFFDMEIG---GRPVGKIVIGLFGEVVPKTVKNFVELAQRAEGEGYVGSKFHRVIENFMIQGGDFTRGDGTGGRSIYGERFEDENFKLQHYGPGWLSMANAGEDTNGSQFFITTAKTSWLDGKHVVFGKI 154          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 4.872e-36
Identity = 77/130 (59.23%), Postives = 85/130 (65.38%), Query Frame = 2
Query:  338 VYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGEKGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            V+FDV  G    K   +IV  LY D VP+TA NFR L TG +GFGYKGS FHRVI DFM Q             SIYG  F DENFKL H  P ++SMANAGPNTNGSQFFI  V  PWLD +HVVFG+V
Sbjct:    4 VFFDVQFGGDAPK---KIVFKLYDDVVPKTAANFRELATGSRGFGYKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEV 130          
BLAST of CX295696 vs. ExPASy Swiss-Prot
Match: PPIB_SCHJA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 77/140 (55.00%), Postives = 92/140 (65.71%), Query Frame = 2
Query:  323 KVTNKVYFDVSIGNPVGKLAGRIVIGLYGDDVPETAENFRALCTGE-----KGFGYKGSTFHRVIKDFMIQXXXXXXXXXXXXXSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQV 727
            KVT KV+FD+ +     +  GRI+IGL+G  VP+T ENF+ L  G      +   YKGSTFHRVIK FMIQ             SIYG  F DENFKL H+G G +SMANAGPNTNG+QFFI T + PWLD +HVVFG+V
Sbjct:   29 KVTEKVFFDIEVDE---QPLGRIIIGLFGKTVPKTVENFKQLSIGTTLKDGRTAAYKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGERFPDENFKLKHVGAGWLSMANAGPNTNGAQFFITTTQNPWLDGKHVVFGKV 165          
The following BLAST results are available for this feature:
BLAST of CX295696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 229
Match NameE-valueIdentityDescription
PPI2_SYNY31.282e-3656.83Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPID_RHIOR2.187e-3659.42Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIB_SCHMA2.187e-3657.14Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PAL4A_HUMAN2.187e-3655.97Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
CP18D_ARATH2.187e-3657.55Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPID_RAT3.730e-3658.2740 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_MOUSE3.730e-3658.2740 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
CYP6_CAEEL3.730e-3656.30Peptidyl-prolyl cis-trans isomerase 6 OS=Caenorhab... [more]
PPIA_PARPR4.872e-3659.23Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIB_SCHJA8.310e-3655.00Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]

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Properties
Property NameValue
Genbank descriptionC05074H10SK DroRLeaf1 Citrus clementina cDNA clone C05074H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX295696 ID=CX295696; Name=CX295696; organism=Citrus clementina; type=EST; length=740bp
ATCTTTTATCTGAATCTCTCACACACCGACTCTGAGGCACTTGTCCATTC
CATCAATGGCGGCAGCGGCTTCATTCGCAGCCCAGATAAATGTAGGCTCG
GTCTCAGGCCCACTTCAACTGAACAAAGCTCTCAGTCCCTCGCGTAATGC
AATCGAGATACCCAGAAAATCTTCTTCATTCCTATCAAATGCTTCATCAT
CCTGCTCCAGCTTCTTCTCCCGTCCGTTGACTCCCGTTCCCCCTCTCACT
CATTTTCCCACCAGGAAAATGGGTACGCGTAGCCTTGTTCGGGCCAGTGC
TGAGGTAGCTGATTTACAATCGAAAGTTACCAATAAAGTTTATTTCGATG
TGAGCATTGGGAATCCAGTAGGAAAGCTTGCTGGAAGAATCGTGATTGGA
TTGTACGGTGATGATGTGCCCGAAACGGCAGAGAACTTCCGTGCTTTATG
CACAGGAGAGAAGGGCTTTGGTTACAAAGGTTCCACGTTCCATCGTGTTA
TCAAAGATTTCATGATCCAAGGAGGAGACTTTGATAAAGGCAATGGAACT
GGAGGTAAAAGTATATACGGCCGTACATTCAAAGATGAGAACTTCAAATT
GTCGCATATTGGACCAGGAGTAGTTAGTATGGCAAATGCAGGTCCCAACA
CTAATGGCAGCCAATTTTTCATTTGCACTGTCAAGACACCATGGCTAGAT
CAGAGGCATGTTGTCTTTGGGCAAGTTTGGAGGCATGGAC
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