CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPV1_PSEAE (Protein clpV1 OS=Pseudomonas aeruginosa GN=clpV1 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.860e-23 Identity = 60/129 (46.51%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGD-VILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I ++Q S +ILFIDE HTL+G+G G GTG D +NLLKP+L RG L+ +A+TT E++ EKD AL RRFQ V + EPS+ A+ ++ G+ E HH + EA+ AAV LS R Sbjct: 287 EQRLRQVIEDVQSSEKPIILFIDEAHTLVGAG----GAAGTG-DAANLLKPALARGTLRTVAATTWAEYKKHIEKDPALTRRFQVVQVDEPSEHKAILMMRGVASTMEKHHQVQILDEALEAAVRLSHR 410
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: HS104_YEAST (Heat shock protein 104 OS=Saccharomyces cerevisiae GN=HSP104 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 53/129 (41.09%), Postives = 78/129 (60.47%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGD-VILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R ++ EI++S ++LFIDE+H L+G+G D +N+LKP+L RG+L+ I +TT +E+R+ EKD A RRFQ + ++EPS V IL GL+ KYE HH + A+ A L+ R Sbjct: 262 EERFKGVLKEIEESKTLIVLFIDEIHMLMGNGKD---------DAANILKPALSRGQLKVIGATTNNEYRSIVEKDGAFERRFQKIEVAEPSVRQTVAILRGLQPKYEIHHGVRILDSALVTAAQLAKR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPL_LACLA (ATP-dependent Clp protease ATP-binding subunit clpL OS=Lactococcus lactis subsp. lactis GN=clpL PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.969e-19 Identity = 52/129 (40.31%), Postives = 82/129 (63.57%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGR-GELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E + L+ E++ +G++ILFIDE+H ++G+G + G + GL ++++KP L +L I +TTQDE+R K+ ALARRF V+I+EP+ D +RIL G++E YE HH+ + AAV S + Sbjct: 231 EENIKQLVEEVKAAGNIILFIDEIHQILGTGALA-GEEVKGL--ADIIKPLLCHVAKLSVIGATTQDEYRNTILKNAALARRFNDVVINEPTAADTLRILQGIKELYEKHHHVVLPDDEKKAAVDYSIK 356
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_STRMU (Chaperone protein clpB OS=Streptococcus mutans GN=clpB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.282e-18 Identity = 50/129 (38.76%), Postives = 79/129 (61.24%), Query Frame = 3 Query: 3 EARVTTLISEI-QKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R L+++I +G +ILFIDE+H+++ +G +G+ +D +++LKP L RG+++ I STT E+R E D+AL RRFQ +L+ EP + + IL GL+ YE H + + + AA LS R Sbjct: 258 EERFKALLNDIIDSNGQIILFIDEIHSIVSAGRT----EGS-VDAASILKPLLARGKIRIIGSTTHAEYRESIEYDRALERRFQRILVHEPDLDYTMEILKGLKPIYENFHGVRLEEDGLEAAASLSKR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB1_CHLTE (Probable chaperone protein clpB 1 OS=Chlorobium tepidum GN=clpB1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 512 DIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKD 688 DIA + S W+GIPV ++ ER L+G+E +L +RV+GQDEAV A+S AVKRSR G+ D Sbjct: 108 DIADIVSRWTGIPVSKMLQSERQKLLGIESELHRRVVGQDEAVRAVSDAVKRSRAGMGD 166 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |