CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPA_BRANA (ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic (Fragment) OS=Brassica napus GN=CLPA PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.767e-31 Identity = 67/126 (53.17%), Postives = 90/126 (71.43%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E RV L+ EI++S ++ILFIDEVHTLIG+G +D +N+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EP+ ++ ++IL GLRE+YE HH ++T E++ AA LS Sbjct: 299 EERVKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA-----IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLS 419 HSP 2 Score: 79.7221 bits (195), Expect = 1.686e-14 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 455 ESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 E S + DE +V DI + S W+GI V++++ DE LL+ +EE L KRVIGQDEAV AISRA++R+RVGLK+P Sbjct: 502 EMSKAESETGDEGPMVTESDIQHIVSSWTGILVEKVSTDESDLLLKMEETLHKRVIGQDEAVKAISRAIRRARVGLKNP 580
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_PEA (ATP-dependent Clp protease ATP-binding subunit clpC homolog, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.837e-31 Identity = 67/126 (53.17%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ L+ EI++S D+ILFIDEVHTLIG+G +D +N+LKP+L RGELQCI +TT DE+R EKD L RRFQPV + EP+ ++ ++IL GLRE+YE HH ++T EA+ AA LS Sbjct: 350 EERLKKLMEEIKQSDDIILFIDEVHTLIGAGAAEGA-----IDAANILKPALARGELQCIGATTLDEYRKHIEKDPDLERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEALIAAAQLS 470 HSP 2 Score: 80.4925 bits (197), Expect = 9.883e-15 Identity = 45/98 (45.92%), Postives = 61/98 (62.24%), Query Frame = 2 Query: 398 RLKYDDVVASMGDTSEIVVESSLPSASDDDEPAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 R K D+ A + E E S DE +V DI + S W+GIPV +++ADE L+ +E+ L KR+IGQDEAV AISRA++R+RVGLK+P Sbjct: 535 RDKEMDLKAQISALIEKGKEMSKAETETADEGPIVTEVDIQHIVSSWTGIPVDKVSADESDRLLKMEDTLHKRIIGQDEAVQAISRAIRRARVGLKNP 632
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.191e-30 Identity = 71/130 (54.62%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ + G +ILFIDE+HTL+G+G KG G +D SNLLKP+L RGEL C+ +TT DE+R EKD ALARRFQPV +SEP+ ED V IL GL+EKYE HH + + AI AA LS R Sbjct: 256 EERLKAVLGEVTAAEGSIILFIDEMHTLVGAG------KGDGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKEKYEVHHGVRISDSAIVAAATLSNR 379 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 2 Query: 491 PAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDPT 694 P VV + IAAV S W+G+PV+++ ER L+ +E++L RV+GQDEA+ A+S AV+R+R GL+DP+ Sbjct: 526 PEVVDAEQIAAVVSRWTGVPVEKMLEGEREKLLKMEDELRGRVVGQDEALEAVSDAVRRARAGLQDPS 593
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPAB_SOLLC (ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic OS=Solanum lycopersicum GN=CD4B PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.862e-30 Identity = 66/126 (52.38%), Postives = 89/126 (70.63%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ L+ EI++S ++ILFIDEVHTLIG+G +D +N+LKP+L RGELQCI +TT DE+R EKD AL RRFQPV + EP+ ++ ++IL GLRE+YE HH ++T E + AA LS Sbjct: 350 EERLKKLMEEIKQSDEIILFIDEVHTLIGAGAAEGA-----IDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDEDLVAAAQLS 470 HSP 2 Score: 74.7146 bits (182), Expect = 5.423e-13 Identity = 38/85 (44.71%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 449 VVESSLPSASDDDEPAVVGP----DDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 +++ + + + E A GP DI + S W+GIPV++++ DE L+ +EE L R+IGQDEAV AISRA++R+RVGLK+P Sbjct: 548 LIDKNKEVSKAESEAADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRAIRRARVGLKNP 632
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_AGRT5 (Chaperone protein clpB OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=clpB PE=3 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 3.738e-30 Identity = 69/130 (53.08%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 3 EARVTTLISEIQ-KSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+Q ++G +ILFIDE+HTL+G+G K G +D SNLLKP+L RGEL C+ +TT DE+R EKD ALARRFQPVL+ EP+ ED + IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLNEVQAENGGIILFIDEMHTLVGAG------KADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVLVDEPNVEDTISILRGLKEKYEQHHKVRISDSALVAAATLSNR 380 HSP 2 Score: 73.1738 bits (178), Expect = 1.578e-12 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 497 VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 VV PD+IA V S W+GIPV ++ +R L+ +E++L K V+GQ EAV A+S+AV+RSR GL+DP Sbjct: 532 VVTPDNIAHVVSRWTGIPVDKMLEGQREKLLRMEDELAKSVVGQGEAVQAVSKAVRRSRAGLQDP 596
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RICTY (Chaperone protein clpB OS=Rickettsia typhi GN=clpB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 70/129 (54.26%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++SEI++S G++ILFIDE+H L+G+G V +D SNLLKP L RGEL CI +TT DE+R EKD ALARRFQPV + EPS ED + IL G++EKYE HH + + AI AA LS R Sbjct: 257 EKRLKSVLSEIKESSGEIILFIDELHLLVGTGKVEGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RICPR (Chaperone protein clpB OS=Rickettsia prowazekii GN=clpB PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.376e-30 Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++SEI++S G++ILFIDE+H L+G+G V +D SNLLKP L RGEL CI +TT DE+R EKD ALARRFQPV + EPS ED + IL G++EKYE HH + + AI AA LS R Sbjct: 257 EKRLKAVLSEIKESSGEIILFIDELHLLVGTGKVDGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVGEPSVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_WOLPM (Chaperone protein clpB OS=Wolbachia pipientis wMel GN=clpB PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.327e-30 Identity = 68/129 (52.71%), Postives = 90/129 (69.77%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I+E+ ++ G VILFIDE+HTL+G+G +D SNLLKP+L RGE++CI +TT DE+R EKD ALARRFQPV IS+P++ D + IL GL+E+YE HH + T AI AA LS R Sbjct: 258 EERLKAVINELSRAEGKVILFIDELHTLVGAGATSGA-----MDASNLLKPALARGEVRCIGATTLDEYRQHIEKDPALARRFQPVFISQPTETDTISILRGLKERYEVHHGIRITDGAIIAAATLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29 Identity = 67/130 (51.54%), Postives = 92/130 (70.77%), Query Frame = 3 Query: 3 EARVTTLISEIQ-KSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E++ + G++ILFIDE+HTL+G+G K G +D SNLLKP+L RGEL C+ +TT DE+R EKD ALARRFQPV++ EP+ ED + IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLNEVRSEGGEIILFIDEMHTLVGAG------KADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDAALARRFQPVMVEEPTVEDTISILRGLKEKYEQHHKVRISDSALVAAAALSNR 380 HSP 2 Score: 72.7886 bits (177), Expect = 2.061e-12 Identity = 35/65 (53.85%), Postives = 49/65 (75.38%), Query Frame = 2 Query: 497 VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 VV PD+IA + S W+GIPV ++ ER L+ +E++L K V+GQ +AV A+SRAV+RSR GL+DP Sbjct: 532 VVTPDNIAHIVSRWTGIPVDKMLEGERDKLLRMEDELAKWVVGQGDAVQAVSRAVRRSRAGLQDP 596
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PROMA (Chaperone protein clpB OS=Prochlorococcus marinus GN=clpB PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.088e-29 Identity = 68/129 (52.71%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ++LFIDE+HT++G+G G +D SNLLKP L RGEL+CI +TT +EHR EKD AL RRFQ VLISEPS ED + IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLKEVTSSQGQIVLFIDEIHTVVGAGATGGA-----MDASNLLKPMLARGELRCIGATTINEHRQHIEKDPALERRFQQVLISEPSIEDTISILRGLKEKYEVHHGVRISDSALVAAAVLSNR 380 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |