CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RICCN (Chaperone protein clpB OS=Rickettsia conorii GN=clpB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 69/129 (53.49%), Postives = 89/129 (68.99%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++SEI++S G++ILFIDE+H L+G+G +D SNLLKP L RGEL CI +TT DE+R EKD ALARRFQPV +SEP+ ED + IL G++EKYE HH + + AI AA LS R Sbjct: 257 EERLKAVLSEIKESSGEIILFIDELHLLVGTGKTDGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDAALARRFQPVYVSEPTVEDTISILRGIKEKYELHHAVRISDSAIVAAATLSNR 380
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 69/130 (53.08%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++SE+ + G++ILFIDE+HTL+G+G K G +D SNLLKP+L RGEL C+ +TT DE+R EKD ALARRFQPV + EP+ ED V IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLSEVTSANGNIILFIDEMHTLVGAG------KADGAMDASNLLKPALARGELHCVGATTLDEYRKHVEKDPALARRFQPVFVDEPTVEDTVSILRGLKEKYEQHHKVRISDSALVAAATLSNR 380 HSP 2 Score: 73.559 bits (179), Expect = 1.208e-12 Identity = 38/85 (44.71%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 452 VESSLPSASDDDEPA-----VVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 +E L A D A VV PD +A + S W+GIPV ++ ER L+ +E+++ KRV+GQ EAV A+S+AV+R+R GL+DP Sbjct: 510 LEKKLKEAEAQDGKAGMVEEVVTPDHVAHIVSRWTGIPVDKMLQGERDKLLRMEDEIGKRVVGQGEAVQAVSKAVRRARAGLQDP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.420e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ++LFIDE+HT++G+G G +G+ +D NLLKP L RGEL+CI +TT DE+R EKD AL RRFQ V +S+PS ED + IL GL+E+YE HH K T A+ AA LS R Sbjct: 260 EERLRAVLHEVTHSDGQMVLFIDELHTVVGAGA---GQQGSAMDAGNLLKPMLARGELRCIGATTTDEYRRTIEKDPALERRFQQVYVSQPSVEDTIAILRGLKERYEGHHGVKITDGALMAAAKLSHR 385 HSP 2 Score: 68.5514 bits (166), Expect = 3.886e-11 Identity = 31/61 (50.82%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 512 DIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDPT 694 DIA + + W+ IPVQ++ ER L+ LE L +RVIGQDEAV A++ A++R+R G+KDP+ Sbjct: 547 DIAEIVARWTNIPVQRLLESERQKLLQLESFLHQRVIGQDEAVVAVAAAIRRARAGMKDPS 607
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.855e-29 Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+ + G +ILFIDE+HTL+G+G K G +D SNLLKP+L RGEL CI +TT DE+R EKD ALARRFQPV +SEP+ ED V IL GL++KYE HH + A+ AAV LS R Sbjct: 258 EERLKAVLNEVTAAEGGIILFIDEMHTLVGAG------KADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYEQHHGVRIADSALVAAVTLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BRAJA (Chaperone protein clpB OS=Bradyrhizobium japonicum GN=clpB PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.423e-29 Identity = 70/130 (53.85%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ILFIDE+HTLIG+G KG G +D SNLLKP+L RGEL CI +TT DE++ EKD ALARRFQP+ +SEPS ED + IL GL++KYE HH + T A+ A+ LS R Sbjct: 258 EERLKAVLQEVTGSEGTFILFIDEMHTLIGAG------KGDGAMDASNLLKPALARGELHCIGATTLDEYQKHVEKDAALARRFQPIFVSEPSVEDTISILRGLKDKYEQHHGVRITDSALVASATLSNR 381
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB1_SYNY3 (Chaperone protein clpB 1 OS=Synechocystis sp. (strain PCC 6803) GN=clpB1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.164e-29 Identity = 68/130 (52.31%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++ E+ S G +ILFIDEVHT++G+G G +G+G +D NLLKP L RGEL+CI +TT DE+R EKD AL RRFQ V + +PS +D + IL GL+EKYE HH K T A+ AA LS R Sbjct: 258 EERLRSVMKEVTNSDGQIILFIDEVHTVVGAG----GREGSGSMDAGNLLKPMLARGELRCIGATTLDEYRKNIEKDPALERRFQQVYVKQPSVDDTISILRGLKEKYEVHHGVKITDSALVAAATLSHR 383 HSP 2 Score: 67.781 bits (164), Expect = 6.629e-11 Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 2 Query: 389 QGSRLKYDDVVASMGDTSEIVVESSLPSASDDDEPAV---VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDPT 694 + +++KY ++ D E ES L + V DIA + + W+GIP+ ++ ER L+ LE L +RVIGQ EAVAA+S A++R+R G+KDP+ Sbjct: 508 KAAKIKYGELEVLQHDIEE--KESKLLEIQGSGNTLLREQVTESDIAEIVAGWTGIPMNRLMETERQKLLQLEGHLHQRVIGQKEAVAAVSAAIRRARAGMKDPS 610
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BRUSU (Chaperone protein clpB OS=Brucella suis GN=clpB PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++SE+Q + G +ILFIDE+HTL+G+G +D SNLLKP+L RGEL C+ +TT +E+R EKD ALARRFQPV + EP+ ED + IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGA-----MDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAATLSNR 380 HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V PD +A V S W+GIPV ++ ER L+ +E+++ KRV+GQ EAV AIS+AV+R+R GL+DP Sbjct: 531 VTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BRUME (Chaperone protein clpB OS=Brucella melitensis GN=clpB PE=3 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++SE+Q + G +ILFIDE+HTL+G+G +D SNLLKP+L RGEL C+ +TT +E+R EKD ALARRFQPV + EP+ ED + IL GL+EKYE HH + + A+ AA LS R Sbjct: 257 EERLKAVLSEVQTAAGQIILFIDEMHTLVGAGKTDGA-----MDASNLLKPALARGELHCVGATTLEEYRKYVEKDAALARRFQPVFVDEPTVEDTISILRGLKEKYEQHHKVRVSDSALVAAAMLSNR 380 HSP 2 Score: 72.4034 bits (176), Expect = 2.691e-12 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V PD +A V S W+GIPV ++ ER L+ +E+++ KRV+GQ EAV AIS+AV+R+R GL+DP Sbjct: 531 VTPDHVAQVISRWTGIPVDRMLEGEREKLLRMEDEIGKRVVGQGEAVQAISKAVRRARAGLQDP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB2_THEEB (Chaperone protein clpB 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpB2 PE=3 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 4.133e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E+ S G ++LFIDE+HT++G+G N+ + +D SNLLKP L RGEL+CI +TT DE+R EKD AL RRFQ V I +PS ED + IL GL+++YE HHN K T A+ AA LS R Sbjct: 257 EDRLKAVLHEVTHSEGQIVLFIDELHTVVGAGA----NQNSSMDASNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVYIGQPSVEDTISILRGLKDRYEIHHNVKITDSALVAAAMLSDR 381 HSP 2 Score: 70.4774 bits (171), Expect = 1.023e-11 Identity = 31/60 (51.67%), Postives = 47/60 (78.33%), Query Frame = 2 Query: 512 DIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 DIA + + W+GIP+Q++ A ER L+ LE+ L +RVIGQ +AVAA++ A++R+R G+KDP Sbjct: 549 DIAEIVAKWTGIPLQKLMASERQKLLQLEQVLHQRVIGQSDAVAAVAAAIRRARAGMKDP 608
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 64/128 (50.00%), Postives = 90/128 (70.31%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ L+ EI+K DVI+FIDE+H ++G+G+ G GN +D N+LKP+L RGELQ + +TT +E+R EKD AL RR QPV + EPS ++ + IL G++ +YE +H+ K+T EAI AA HLS R Sbjct: 202 EERMQKLMDEIRKRNDVIMFIDEIHEIVGAGSAGDGN----MDAGNILKPALARGELQLVGATTLNEYRI-IEKDAALERRMQPVKVDEPSVDETITILRGIQARYEDYHHVKYTDEAIEAAAHLSNR 324 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |