CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_CYACA (ATP-dependent Clp protease ATP-binding subunit clpA homolog OS=Cyanidium caldarium GN=clpC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 65/126 (51.59%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ ++ EI+ + +VIL IDEVHTLIG+G +D +N+LKP+L RGELQCI +TT +E+R EKD AL RRFQPV++ EP+ E+ + IL GLR++YEAHH K + AI AA LS Sbjct: 288 EERLKKIMDEIRMADNVILVIDEVHTLIGAGAAEGA-----IDAANILKPALARGELQCIGATTLEEYRKHIEKDAALERRFQPVMVEEPTVEETIEILRGLRDRYEAHHRLKISDSAIVAAAKLS 408 HSP 2 Score: 76.6406 bits (187), Expect = 1.427e-13 Identity = 34/67 (50.75%), Postives = 50/67 (74.63%), Query Frame = 2 Query: 491 PAVVGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 P +V DDIA + S W+GIPV ++T E L+ +EE L R++GQ+EAV A+S+A++R+RVGLK+P Sbjct: 502 PPIVNEDDIANIVSSWTGIPVSKLTKSESEKLLHMEETLHSRIVGQNEAVIAVSKAIRRARVGLKNP 568
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PHOPR (Chaperone protein clpB OS=Photobacterium profundum GN=clpB PE=3 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.398e-29 Identity = 67/130 (51.54%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 EARVTTLISEI-QKSGDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E+ Q+ G VILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EP+ ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKSVLNELSQEEGSVILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_CHLPN (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia pneumoniae GN=clpC PE=3 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 60/126 (47.62%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ ++ E++K G+++LFIDE+HT++G+G +D SN+LKP+L RGE+QCI +TT DE+R EKD AL RRFQ +++ PS ++ + IL GL++KYE HHN T EA+ AA LS Sbjct: 282 EERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGA-----IDASNILKPALARGEIQCIGATTIDEYRKHIEKDAALERRFQKIVVHPPSVDETIEILRGLKKKYEEHHNVFITEEALKAAATLS 402
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 68/130 (52.31%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E+ K G+VILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EP+ ED V IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKSVLNELAKEEGNVILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PSESM (Chaperone protein clpB OS=Pseudomonas syringae pv. tomato GN=clpB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 67/130 (51.54%), Postives = 89/130 (68.46%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +L++E+ K G +ILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT +E+R EKD AL RRFQ VL+ EPS+ED + IL GL+E+YE HH T AI AA LS R Sbjct: 256 EERLKSLLNELSKQEGQIILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLNEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379 HSP 2 Score: 67.3958 bits (163), Expect = 8.658e-11 Identity = 34/64 (53.12%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V ++IA V S W+GIPV ++ ER L+ +E L RVIGQ+EAV A+S AV+RSR GL DP Sbjct: 531 VTEEEIAEVVSKWTGIPVSKMLEGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.050e-29 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ E++KS G +I+FIDE+HT++G+G +D SNLLKP L RGEL CI +TT DE+R EKD AL RRFQPVL+ EP+ EDA+ IL GL+E++E HH + + AI AV LS R Sbjct: 261 EERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGA-----MDASNLLKPMLARGELHCIGATTLDEYRKYIEKDPALERRFQPVLVDEPTIEDAISILRGLKERFEVHHGVRISDSAIVEAVTLSHR 384 HSP 2 Score: 68.9366 bits (167), Expect = 2.976e-11 Identity = 33/65 (50.77%), Postives = 46/65 (70.77%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDPT 694 V PDDIA + + W+GIPV ++ ER L+ L + L +RV+GQ+EAV A+S AV R+R GL DP+ Sbjct: 536 VRPDDIAEIVARWTGIPVTRLLESEREKLLRLADVLHERVVGQEEAVDAVSEAVLRARAGLSDPS 600
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E+ K G++ILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EP+ ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKSVLNELSKEEGNIILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 66/130 (50.77%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E+ K G++ILFIDE+HT++G+G KG G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EP+ ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 256 EERLKSVLNELSKEEGNIILFIDELHTMVGAG------KGEGSMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_HAEDU (Chaperone protein clpB OS=Haemophilus ducreyi GN=clpB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 67/129 (51.94%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+ K G VILFIDE+HT++G+G +D NLLKPSL RGEL C+ +TT DE+R EKD AL RRFQ VL+ EPS ED + IL GL+E+YE HH+ + T AI AA LS R Sbjct: 254 EERLKAVLNELAKEEGQVILFIDEIHTMVGAGKTDGA-----MDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.207e-29 Identity = 67/130 (51.54%), Postives = 94/130 (72.31%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++++E++KS GD+ILFIDE+HTL+G+G KG G +D +N+LKP+L RGEL+ I +TT DE++ FEKDKAL RRFQ V + EP + IL GL+E+YE HH+ + +AI AAV LS+R Sbjct: 254 EERLKSVVNEVKKSEGDIILFIDEIHTLVGAG------KGEGAMDAANILKPALARGELRSIGATTLDEYQKYFEKDKALERRFQIVQVDEPDTLSTISILRGLKERYENHHHVRIKDDAIIAAVELSSR 377 HSP 2 Score: 70.8626 bits (172), Expect = 7.830e-12 Identity = 34/64 (53.12%), Postives = 48/64 (75.00%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V +DIA V S W+GIPV ++ E+ L+ LE++L +RVIGQDEA+ A++ AV+RSR GL+DP Sbjct: 529 VDAEDIADVVSRWTGIPVSKMMQSEKDKLLHLEDELHQRVIGQDEAIEAVADAVRRSRAGLQDP 592 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |