CX295702
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_CHLTR (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia trachomatis GN=clpC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 60/126 (47.62%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ ++ E++K G+++LFIDE+HT++G+G +D S++LKP+L RGE+QCI +TT DE+R EKD AL RRFQ +++ PS ++ V IL GL++KYE HHN T EA+ AA LS Sbjct: 284 EERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGA-----IDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLS 404
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPC_CHLMU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Chlamydia muridarum GN=clpC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 60/126 (47.62%), Postives = 87/126 (69.05%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLS 380 E R+ ++ E++K G+++LFIDE+HT++G+G +D S++LKP+L RGE+QCI +TT DE+R EKD AL RRFQ +++ PS ++ V IL GL++KYE HHN T EA+ AA LS Sbjct: 301 EERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGA-----IDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLS 421
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PROMP (Chaperone protein clpB OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=clpB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 64/129 (49.61%), Postives = 87/129 (67.44%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ +++ S G +ILFIDE+HT++G+G G LD SNLLKP L RGEL+CI +TT +EH+ EKD AL RRFQ + I+ PS +D + IL GLREKYE HH+ + + A+ AA LS R Sbjct: 254 EERIKNVLKKVKSSEGKIILFIDEIHTVVGAGATGGS-----LDASNLLKPMLARGELRCIGATTINEHKQNIEKDPALERRFQKIKINAPSVDDTISILRGLREKYEVHHSVRISDNALVAAASLSER 377
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_HELPY (Chaperone protein clpB OS=Helicobacter pylori GN=clpB PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 64/128 (50.00%), Postives = 91/128 (71.09%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E++KS +VILFIDE+HT++G+G ++G G+D +N+LKP+L RGEL I +TT E+R FEKD AL RRFQP+L++EPS +A++IL GL+E E HHN A+ A+ LS+R Sbjct: 254 EERLKKVIEEVKKSANVILFIDEIHTIVGAGA----SEG-GMDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSR 376
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_HELPJ (Chaperone protein clpB OS=Helicobacter pylori J99 GN=clpB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 64/128 (50.00%), Postives = 91/128 (71.09%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +I E++KS +VILFIDE+HT++G+G ++G G+D +N+LKP+L RGEL I +TT E+R FEKD AL RRFQP+L++EPS +A++IL GL+E E HHN A+ A+ LS+R Sbjct: 254 EERLKKVIEEVKKSANVILFIDEIHTIVGAGA----SEG-GMDAANILKPALARGELHTIGATTLKEYRKYFEKDMALQRRFQPILLNEPSINEALQILRGLKETLETHHNITINDSALIASAKLSSR 376
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.679e-28 Identity = 68/130 (52.31%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ ++ +I K G VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EPS EDA+ IL GL+E+YE HH + T AI AA LS R Sbjct: 256 EERLKAVLKDIAKEEGRVILFIDELHTMVGAG------KAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQR 379
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_PSEAE (Chaperone protein clpB OS=Pseudomonas aeruginosa GN=clpB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 67/130 (51.54%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTG-LDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++E+ K G VILFIDE+HT++G+G K G +D N+LKP+L RGEL C+ +TT DE+R EKD AL RRFQ VL+ EPS+ED + IL GL+E+YE HH T AI AA LS R Sbjct: 256 EERLKAVLNELGKQEGRVILFIDELHTMVGAG------KAEGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379 HSP 2 Score: 72.0182 bits (175), Expect = 3.515e-12 Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 500 VGPDDIAAVASLWSGIPVQQITADERMLLVGLEEQLXKRVIGQDEAVAAISRAVKRSRVGLKDP 691 V ++IA V S W+GIPV ++ ER L+ +E++L +RVIGQDEAV A+S AV+RSR GL DP Sbjct: 531 VTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADP 594
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CHLTR (Chaperone protein clpB OS=Chlamydia trachomatis GN=clpB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 67/129 (51.94%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQKS-GDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++ ++ S G+ ILFIDEVHTL+G+G +D +NLLKP+L RG L CI +TT +E++ EKD AL RRFQP+ ++EPS EDAV IL GLREKYE H + T A+NAAV LS R Sbjct: 255 EERLKSVLKGVEASEGECILFIDEVHTLVGAGATDGA-----MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVVLSYR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPB_CHLCV (Chaperone protein clpB OS=Chlamydophila caviae GN=clpB PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.569e-28 Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 Query: 3 EARVTTLISEIQK-SGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ +++ +++ G+ ILFIDEVHTL+G+G +D +NLLKP+L RG L CI +TT +E++ EKD AL RRFQP+ ++EPS EDAV IL GLREKYE H + T A+NAAV LS R Sbjct: 255 EERLKSVLKDVESVDGESILFIDEVHTLVGAGATDGA-----MDAANLLKPALARGTLHCIGATTLNEYQKYIEKDAALERRFQPIFVTEPSLEDAVFILRGLREKYEIFHGVRITEGALNAAVLLSYR 378
BLAST of CX295702 vs. ExPASy Swiss-Prot
Match: CLPE_BACSU (ATP-dependent Clp protease ATP-binding subunit clpE OS=Bacillus subtilis GN=clpE PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.968e-28 Identity = 67/128 (52.34%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 3 EARVTTLISEIQKSGDVILFIDEVHTLIGSGTVGRGNKGTGLDISNLLKPSLGRGELQCIASTTQDEHRTQFEKDKALARRFQPVLISEPSQEDAVRILLGLREKYEAHHNCKFTLEAINAAVHLSAR 386 E R+ LI+E+++ +VILFIDE+H L+G+G+ +G+ +D N+LKP+L RGELQ I +TT E+R Q EKD AL RRFQPV++ EPS E A+ IL G+++KYEA+H F+ EAI A V LS+R Sbjct: 169 EERMKQLITELKERKNVILFIDEIHLLVGAGSA----EGS-MDAGNILKPALARGELQVIGATTLKEYR-QIEKDAALERRFQPVMVQEPSIEQAILILQGIKDKYEAYHGVTFSDEAIKACVTLSSR 290 The following BLAST results are available for this feature:
BLAST of CX295702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295702 ID=CX295702; Name=CX295702; organism=Citrus clementina; type=EST; length=710bpback to top |