CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHISS (Triosephosphate isomerase OS=Shigella sonnei (strain Ss046) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHIFL (Triosephosphate isomerase OS=Shigella flexneri GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHIF8 (Triosephosphate isomerase OS=Shigella flexneri serotype 5b (strain 8401) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHIDS (Triosephosphate isomerase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHIBS (Triosephosphate isomerase OS=Shigella boydii serotype 4 (strain Sb227) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHIB3 (Triosephosphate isomerase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSEE4 (Triosephosphate isomerase OS=Pseudomonas entomophila (strain L48) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 91/192 (47.40%), Postives = 125/192 (65.10%), Query Frame = 3 Query: 99 HVAAQNCWVK-KGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 +V AQN V+ + GA TGE++ L + +V++GHSERR I+ ES+E + K A A GL + C+GETL +REAG T+ VV Q ++ D + +++N V+AYEPVWAIGTG A+P QAQ+VH +RK L A E+AA +++YGGSV AN EL PD+DG L+GGASL EF I ++A Sbjct: 59 NVGAQNSAVQPEQGALTGEVAPSQLAEVGCKYVLVGHSERRQIIGESDEVLNQKFAAAQKSGLTPVLCIGETLAEREAGETLKVVGRQLSSVIDAFGIKAFANAVIAYEPVWAIGTGLTASPQQAQDVHAAIRKQL-AAMDAEVAANVQLLYGGSVKAANAAELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_HAES1 (Triosephosphate isomerase OS=Haemophilus somnus (strain 129Pt) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 92/195 (47.18%), Postives = 119/195 (61.03%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDIIKSAELK 671 D + QN + K GAFTG+IS EML + + +VI+GHSERR +ES+EF+ K GL + C+GE+ + EAG T +V A Q A+ + V +++ V+AYEP+WAIGTGK ATP QAQ VH +R + A S +A I YGGSVN AN EL QPD+DG LVGGASLK +I A K Sbjct: 59 DIALGTQNVDLNKQGAFTGDISTEMLKDFGVKYVIIGHSERRQYHHESDEFIAKKFGVLKDAGLVPVLCIGESEAENEAGKTEEVCARQIDAVMNTLGVEAFNGAVIAYEPIWAIGTGKSATPAQAQAVHAFIRGHI-AKQSQAVAERVIIQYGGSVNDANAAELFTQPDIDGALVGGASLKASAFAVIVKAAAK 252
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ESCF3 (Triosephosphate isomerase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ECOUT (Triosephosphate isomerase OS=Escherichia coli (strain UTI89 / UPEC) GN=tpiA PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.087e-40 Identity = 94/191 (49.21%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 + AQN + GAFTGE SA ML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A IA I YGGSVN +N EL AQPD+DG LVGGASLK + F I+K+AE Sbjct: 61 LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |