CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SODGM (Triosephosphate isomerase OS=Sodalis glossinidius (strain morsitans) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 91/190 (47.89%), Postives = 119/190 (62.63%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQN GA+TGE+SAEML ++ ++I+GHSERR ES+EF+ +K A L + C+GE+ + EAG T V A Q A+ + + ++ N V+AYEP+WAIGTGK ATP QAQ VH +R + A IA I YGGSVN AN EL QPD+DG LVGGASLK + F I+K+A Sbjct: 61 LGAQNVDTHLSGAYTGEVSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAEKFAVLKEAELIPVLCIGESEAENEAGQTEAVCARQIDAVLNSLGAKAFENTVIAYEPIWAIGTGKSATPAQAQAVHKFIRDHI-AKHDAAIAEQVIIQYGGSVNAANAAELFTQPDIDGALVGGASLKADAFAVIVKAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_EXIS2 (Triosephosphate isomerase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=tpiA PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 91/190 (47.89%), Postives = 113/190 (59.47%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 L +++ D + AQN + ++ GAFTGEIS ML L + +V+LGHSERR E++ F+ K A GL I CVGETLE+RE G V+ QT V N+V+AYEPVWAIGTGK AT AQ+ +R + A E A A RI YGGSV N KE AQPD+DG LVGGASL+ Sbjct: 50 LTEATAGTDLKIGAQNMYDQESGAFTGEISPVMLKELGVTYVVLGHSERREYFGETDAFINSKTKKAFEHGLVPIVCVGETLEEREGGKFESVIREQTTNSLKGLTVDQVKNLVVAYEPVWAIGTGKSATEQDAQDSCKFVRDVIAAEFGTEAAEAVRIQYGGSVKPDNIKEYMAQPDIDGALVGGASLE 239
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_RHOFD (Triosephosphate isomerase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38 Identity = 97/189 (51.32%), Postives = 121/189 (64.02%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 + AQ+ + GAFTGEIS ML + + I+GHSERR E++ V K AL+ G+ I CVGETL +REAG T +VV Q A+ S +V+AYEPVWAIGTGK A+ QAQ+VH LR+ L A + A +IIYGGS+N AN EL AQPD+DG LVGGASLK P+F+ II SA Sbjct: 60 LGAQDLSQHEVGAFTGEISGAMLQEFGVRYCIVGHSERRQYHFETDALVAAKAQRALACGITPIVCVGETLAEREAGRTEEVVKRQLAAVIHANGHCISEVVVAYEPVWAIGTGKTASIEQAQQVHSVLRQQLQAASIQ--ADRIQIIYGGSMNAANAAELLAQPDIDGGLVGGASLKVPDFLSIIASA 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSEMY (Triosephosphate isomerase OS=Pseudomonas mendocina (strain ymp) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38 Identity = 95/191 (49.74%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 102 VAAQNCWVK-KGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 V AQ+C + + GA TGE++ LV+ V++GHSERRLIL ES+E V K A GL + CVGET EQREA +T+ VV Q A+ D V + +N V+AYEPVWAIGTG ATP QAQEVH +R + A ++A+ RI+YGGSV A+ EL D+DG LVGGASL EF I ++A Sbjct: 60 VGAQDCAAQVEQGALTGELAVSQLVDGGCELVLVGHSERRLILGESDEVVVSKFAAVQKAGLTPVLCVGETREQREANATLGVVGGQLAAVIDALGVQALNNAVVAYEPVWAIGTGLTATPEQAQEVHAAIRAQV-AQLDAQVASELRILYGGSVKAASAAELFGMQDIDGGLVGGASLNADEFGAICRAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_LACCB (Triosephosphate isomerase OS=Lactobacillus casei (strain BL23) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38 Identity = 91/183 (49.73%), Postives = 117/183 (63.93%), Query Frame = 3 Query: 105 AAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI-----ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AA+NC+ + GAFTGE S + L +++ +VI+GHSERR +E++E + K L I C GE+L QREAG T D VA+Q +A AD+V VLAYEP+WAIGTGK AT QAQEV +R + + + A A RI+YGGSV AN KEL A+PD+DG LVGGAS+ PE Sbjct: 62 AAENCYFEDEGAFTGETSPKALKEMNVDYVIIGHSERRGYFHETDEDINKKAKAIFKNNLLPIICCGESLAQREAGQTEDWVASQIEAALAGLSADQVKV---SVLAYEPIWAIGTGKTATADQAQEVVAHIRATVEKLYNKDTADAVRILYGGSVKPANVKELMAKPDIDGGLVGGASMDPE 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_LACC3 (Triosephosphate isomerase OS=Lactobacillus casei (strain ATCC 334) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38 Identity = 91/183 (49.73%), Postives = 117/183 (63.93%), Query Frame = 3 Query: 105 AAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI-----ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 AA+NC+ + GAFTGE S + L +++ +VI+GHSERR +E++E + K L I C GE+L QREAG T D VA+Q +A AD+V VLAYEP+WAIGTGK AT QAQEV +R + + + A A RI+YGGSV AN KEL A+PD+DG LVGGAS+ PE Sbjct: 62 AAENCYFEDEGAFTGETSPKALKEMNVDYVIIGHSERRGYFHETDEDINKKAKAIFKNNLLPIICCGESLAQREAGQTEDWVASQIEAALAGLSADQVKV---SVLAYEPIWAIGTGKTATADQAQEVVAHIRATVEKLYNKDTADAVRILYGGSVKPANVKELMAKPDIDGGLVGGASMDPE 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_HALHL (Triosephosphate isomerase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=tpiA PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.297e-38 Identity = 90/190 (47.37%), Postives = 118/190 (62.11%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 + AQ+ GA+TGE+SA ML+ +VI+GHSERR + E N V K A + GL I CVGETL +R+A T VV Q A+ D V +++ V+AYEPVWAIGTG+ ATP QAQ VH +R+ + + EIA I+YGGS+ N EL AQPD+DG L+GGASL P+ F+ I +A Sbjct: 57 LGAQDVSEYDSGAYTGEVSASMLLEAGCRYVIVGHSERRTLYGEDNGRVAGKFVAARNAGLTPILCVGETLAERDAERTESVVGEQLDAVMDAVGGATFQGAVIAYEPVWAIGTGRTATPEQAQAVHAFIRQRVQERDAGEIADQLPILYGGSMKADNAAELLAQPDIDGGLIGGASLDPDSFLSIYNAA 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BAUCH (Triosephosphate isomerase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=tpiA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38 Identity = 93/193 (48.19%), Postives = 122/193 (63.21%), Query Frame = 3 Query: 99 HVA--AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 H+A AQN + GAFTGEISA+ML ++ ++I+GH ERRL ESNE + +K A ++GL + C+GET E+ E T + Q I + V ++ N V+AYEP+WAI TGK A P+Q Q++H +R +LF N IA I YGGSVN +N EL QPDVDG LVGGASLK + F IIK+A Sbjct: 59 HIALGAQNVDLHVSGAFTGEISAKMLKDIGAKYIIIGHIERRLYHKESNEDIANKFACLKNEGLIPVLCIGETKEENEKDQTKAICVRQLDYILNIVGTQAFKNAVIAYEPIWAIATGKSANPLQIQKIHKFIRSYLF-NHDQAIAEQVIIQYGGSVNASNAAELFNQPDVDGALVGGASLKADIFATIIKAA 250
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BACHD (Triosephosphate isomerase OS=Bacillus halodurans GN=tpiA PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.694e-38 Identity = 93/203 (45.81%), Postives = 124/203 (61.08%), Query Frame = 3 Query: 66 GLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIADRVSSWSNI-VLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 GLV+ + + + AQN ++ GAFTGEIS L ++ + +VILGHSERR + E++E V K A + GL I CVGETLE+REA T DVV Q K + + V+AYEPVWAIGTGK ++ A +V +RK + S E A A RI YGGSV AN E AQ D+DG LVGGASL P+ F+ ++++ + Sbjct: 49 GLVQKAEGTELRIGAQNMHFEESGAFTGEISPVALSDMKVDYVILGHSERRDMFAETDELVNKKTHAAFAHGLTPIVCVGETLEEREANQTYDVVKTQVEKGLEGLTDEQVKVTVIAYEPVWAIGTGKSSSAEDANDVCSYIRKVVTEKFSQEAADAVRIQYGGSVKPANIAEYMAQSDIDGALVGGASLDPQSFLQLLEAVK 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_XANAC (Triosephosphate isomerase OS=Xanthomonas axonopodis pv. citri GN=tpiA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.213e-38 Identity = 96/188 (51.06%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSA 662 AQ+ + GA+TGE+SA MLV++ + ++GHSERR ES+E V K A AL GL + CVGE+LEQREAG T ++ AQ + V S ++ VLAYEP+WAIGTG+ ATP QAQ VH LR + A IA + I+YGGSV N EL AQPDVDG LVGGASL E F+ I ++A Sbjct: 62 AQDVSSNEKGAYTGEVSASMLVDVGAGYGLVGHSERRQYHQESSELVARKFAAALHAGLIPVLCVGESLEQREAGQTEAILRAQLDPVLALVGSAGFAGAVLAYEPIWAIGTGRTATPEQAQAVHAFLRGEV-AKADARIADSLPILYGGSVKPDNAGELFAQPDVDGGLVGGASLVAEDFLAIARAA 248 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |