CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHESR (Triosephosphate isomerase OS=Shewanella sp. (strain MR-7) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHESM (Triosephosphate isomerase OS=Shewanella sp. (strain MR-4) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHESA (Triosephosphate isomerase OS=Shewanella sp. (strain ANA-3) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEON (Triosephosphate isomerase OS=Shewanella oneidensis GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDCGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSTEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_CLOPH (Triosephosphate isomerase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 88/196 (44.90%), Postives = 121/196 (61.73%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPEFIDII 653 ++++ + + A+N + ++ GA+TGEI+ ML ++ + +VI+GHSERR ES+ V KV AL G+ I C GE+L QRE G T+D + Q K V++ + V+AYEP+WAIGTGKVAT QAQEV +R + A A RI YGGSV A+ EL Q D+DG LVGGASLKP+F I+ Sbjct: 50 IEAAKGSNISIGAENMFYEESGAYTGEIAPNMLTDIGVKYVIIGHSERREYFAESDITVNKKVLKALEHGITPIICCGESLTQREQGITIDWIRQQIKIAFLNVTAEQAATTVIAYEPIWAIGTGKVATTEQAQEVCAAIRVCIGELYGETTAEAIRIQYGGSVTAASAPELFTQSDIDGGLVGGASLKPDFGQIV 245
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_AZOSB (Triosephosphate isomerase OS=Azoarcus sp. (strain BH72) GN=tpiA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.434e-37 Identity = 93/201 (46.27%), Postives = 123/201 (61.19%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 662 LV SL + AQ+ + GA+TGE+SA MLV +VI+GHSERR + +S++ VG K A AL+ GL I CVGETL +RE G V+ Q +A+AD V + +V+AYEPVWAIGTG+ ATP Q + H +R W A A+A RI+YGGSV N L + DVDG L+GGASL +F+ I ++A Sbjct: 48 LVAGSL---IELGAQDVSEYEQGAYTGEVSAAMLVEFGCRYVIVGHSERRALFGDSDQVVGRKAASALAAGLTPIVCVGETLAERELGEVEAVIRRQLQAVADCVGGEALPTLVVAYEPVWAIGTGRSATPEQVAQTHGFIRAWFSARCD---ASAVRILYGGSVKPENAAVLFSTDDVDGGLIGGASLVGSDFVAICRAA 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHESW (Triosephosphate isomerase OS=Shewanella sp. (strain W3-18-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPC (Triosephosphate isomerase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB9 (Triosephosphate isomerase OS=Shewanella baltica (strain OS195) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB8 (Triosephosphate isomerase OS=Shewanella baltica (strain OS185) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |