CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEB5 (Triosephosphate isomerase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGE+S +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + + ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEVSGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDIVIQKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_IDILO (Triosephosphate isomerase OS=Idiomarina loihiensis GN=tpiA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.873e-37 Identity = 88/194 (45.36%), Postives = 121/194 (62.37%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSWS-NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 665 D + AQN GGAFTGEIS L + +V++GHSERR + E+++ V +K ++ G+ + CVGE QR+ G+T +VVA Q + A+AD + IVLAYEPVWAIGTG+ A+P QAQ+VH +LR L I ++YGGSV N EL AQ D+DG L+GGASLK +F+ I ++A+ Sbjct: 59 DIAIGAQNVSEHTGGAFTGEISTAQLQEFGVSYVLVGHSERRQLFAETDKMVNEKALATVNAGMTAVICVGENKAQRDEGNTWEVVAQQAQAALADLPKEQAGKIVLAYEPVWAIGTGETASPEQAQDVHAKLRA-LLVEQFGAIGEKMPLLYGGSVKADNAAELFAQKDIDGGLIGGASLKESDFVAICQAAQ 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_GEOBB (Triosephosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 89/191 (46.60%), Postives = 119/191 (62.30%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 665 +AAQ+ + ++ GAFTGE+S ML++ VI+GHSERR E+ E V KV AL L I C+GETLE REAG T V+ Q K + ++ ++ +++AYEPVWAIGTGKVA+ QAQE H +R + A RI+YGGSV N K L ++PD+DG LVGGASLK F I++ +E Sbjct: 61 LAAQDVFWEEEGAFTGEVSPRMLLDAGASHVIIGHSERRQYFGETEETVNKKVKAALKGALVPIVCIGETLEAREAGDTFKVLERQLKGGLEGLTGTQFAPVIVAYEPVWAIGTGKVASDDQAQEAHAFIRGVIAGLFGKSAADKVRILYGGSVKPDNVKGLMSRPDIDGALVGGASLKGASFASIVRYSE 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BACP2 (Triosephosphate isomerase OS=Bacillus pumilus (strain SAFR-032) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 2.446e-37 Identity = 88/194 (45.36%), Postives = 121/194 (62.37%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 D + AQN ++ GAFTGEIS L +L I + ++GHSERR E++E V K A G+ I CVGETLE+REAG T ++VA Q KA+A + V+AYEP+WAIGTGK +T A +V +R+ + + E A + RI YGGSV AN KE A+ D+DG LVGGASL+P+ F+ +++ + Sbjct: 58 DLKIGAQNMHFEENGAFTGEISPAALKDLGIGYSVIGHSERREFFAETDETVNKKAHAAFKHGIVPIICVGETLEEREAGKTNELVADQVKKALAGFTTQQVAESVIAYEPIWAIGTGKSSTAKDANDVCAHIRQTVASEYGQEAADSLRIQYGGSVKPANIKEYMAESDIDGALVGGASLEPQSFVQLLEEGQ 251
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STAES (Triosephosphate isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 87/201 (43.28%), Postives = 121/201 (60.20%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 VK + AQN + ++ GA+TGE S L L + +V++GHSERR +E++E V K + G+ I CVGE+ E+REAG +V Q K + +S +V+AYEP+WAIGTGK +T A E+ +R+ L +S E+A ATRI YGGSV N KE AQ D+DG LVGGASLK E F+ +++ A+ Sbjct: 53 VKDGKAKGLKIGAQNAYFEESGAYTGETSPVALSELGVKYVVIGHSERRDYFHETDEEVNKKAHAIFNHGMTPIICVGESDEEREAGKANKIVGNQVKKAVEGLSDDQLKEVVIAYEPIWAIGTGKSSTSEDANEMCAHVRQTLADLSSQEVADATRIQYGGSVKPNNIKEYMAQSDIDGALVGGASLKVEDFVQLLEGAK 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STAEQ (Triosephosphate isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 87/201 (43.28%), Postives = 121/201 (60.20%), Query Frame = 3 Query: 72 VKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 VK + AQN + ++ GA+TGE S L L + +V++GHSERR +E++E V K + G+ I CVGE+ E+REAG +V Q K + +S +V+AYEP+WAIGTGK +T A E+ +R+ L +S E+A ATRI YGGSV N KE AQ D+DG LVGGASLK E F+ +++ A+ Sbjct: 53 VKDGKAKGLKIGAQNAYFEESGAYTGETSPVALSELGVKYVVIGHSERRDYFHETDEEVNKKAHAIFNHGMTPIICVGESDEEREAGKANKIVGNQVKKAVEGLSDDQLKEVVIAYEPIWAIGTGKSSTSEDANEMCAHVRQTLADLSSQEVADATRIQYGGSVKPNNIKEYMAQSDIDGALVGGASLKVEDFVQLLEGAK 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPW (Triosephosphate isomerase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 88/194 (45.36%), Postives = 120/194 (61.86%), Query Frame = 3 Query: 105 AAQNCWVKKG---------GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDI 650 A C V+ G GA+TGEIS +ML + +VI+GHSERR + E+++ V +K A A GL I CVGE+ REA T +V+A + + ++ ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + Sbjct: 61 ALNGCLVRMGTQNVSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSDIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNATEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEHH (Triosephosphate isomerase OS=Shewanella halifaxensis (strain HAW-EB4) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 87/186 (46.77%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDI 650 + AQN GA+TGEIS +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + ++ ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSVIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNATEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_LACGA (Triosephosphate isomerase OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 L K++ D H A+N + + GAFTGE S ++L + I + I+GHSERR +E++E + K + G+ I C GE+LE REA D V AQ KA D +++ S +V+AYEP+WAIGTGK A+ QA+E+ +R+ + + E A RI YGGSV AN KEL ++PD+DG LVGGASL PE Sbjct: 50 LKKAAEGSDLHTGAENAYFEVEGAFTGETSPKVLNEMGIDYCIIGHSERRGYFHETDEDINKKAKALFANGVTPIICCGESLETREANKQEDWVVAQIKAALDGLTAEQVSKLVIAYEPIWAIGTGKTASADQAEEMCKTIRETVKDLYNEETAENVRIQYGGSVKPANVKELMSKPDIDGGLVGGASLDPE 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BACLD (Triosephosphate isomerase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=tpiA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.195e-37 Identity = 91/206 (44.17%), Postives = 129/206 (62.62%), Query Frame = 3 Query: 60 FLGLVKSSLR-PDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW-SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 FL + S+++ D V AQN ++ GAFTGEIS L +L + + ++GHSERR + E++E V K A G+ I CVGETLE+REA T ++VA Q K A+A + + V+AYEP+WAIGTGK +T A EV +RK + + A + RI YGGSV AN KE A+ D+DG LVGGASL+P+ F+ ++++ + Sbjct: 46 FLEKLTSAVKGTDLKVGAQNMHFEESGAFTGEISPAALKDLGVEYCVIGHSERREMFAETDETVNKKAHAAFKYGIVPIICVGETLEEREANKTNELVADQVKKALAGLTTEQVAASVIAYEPIWAIGTGKSSTAQDANEVCAHIRKTVASEFGQTAADSVRIQYGGSVKPANIKEYMAESDIDGALVGGASLEPQSFVQLLEAGQ 251 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |