CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SILPO (Triosephosphate isomerase OS=Silicibacter pomeroyi GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 91/189 (48.15%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSAE 665 + Q+C GA TG+ISA ML + VILGHSERR E++ V DK AL GL I C+GETL QREAG T+DVV AQ + +V+AYEPVWAIGTG V T Q EVH LR+ L E A A R++YGGSV N E+ A +VDG LVGGASL +F I+ + E Sbjct: 59 IGGQDCHAVTAGAHTGDISAMMLADAGASAVILGHSERRADHGETDAQVCDKARAALEAGLIAIICIGETLAQREAGQTLDVVCAQLAGSVPDGIDGTRVVVAYEPVWAIGTGLVPTLEQIAEVHDTLRQQLIGRFGSETAEAIRLLYGGSVKPGNAAEIFAVSNVDGALVGGASLTAADFSPIVSALE 247
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSEHT (Triosephosphate isomerase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 90/202 (44.55%), Postives = 124/202 (61.39%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDIIKSAE 665 LV + + Q GAFTGE+ A+++ L +V++GHSERR I ESN+ V K A A GL I CVGE+ ++E G T +VAAQ A+ ++ V++ + V+AYEPVWAIGTGK A+P QAQ VH +R + A+ + ++A I+YGGSVN N + L AQ D+DG L+GGASLK + F I SA+ Sbjct: 46 LVSAMIASGVSTGTQTVSENTPGAFTGEVDAQLIKELGAQYVLVGHSERRSIYKESNDVVAAKFARAQQVGLTPILCVGESESEQENGKTEQIVAAQIDAVIEKLGVAALKDSVIAYEPVWAIGTGKTASPEQAQSVHKFIRDKI-ASLNSDLAQGLTILYGGSVNEKNSELLFAQTDIDGGLIGGASLKADSFTAICNSAK 246
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DESVM (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.173e-37 Identity = 85/184 (46.20%), Postives = 117/184 (63.59%), Query Frame = 3 Query: 96 FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS---WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 + V Q+ + GA+TGEIS ML++ WV+ GHSERR ++ ES+E VG K A++++ GLKV+ C+GET+E+REAG +V+ Q + V + I +AYEPVWAIGTGKVA P + E H +R+ L A E A RI+YGGSV N +E+ A +VDG LVGGASL+ + Sbjct: 61 YSVGGQDVYPAAEGAYTGEISPGMLMDCGCAWVLTGHSERRHVIGESDELVGAKTAFSINAGLKVVLCIGETIEEREAGRLGEVLERQLETGLAGVKGDAVPAAIAVAYEPVWAIGTGKVAGPPEIVEAHALVRQLLVARFG-EGGVAVRILYGGSVKPENAREIIALDNVDGVLVGGASLQAD 243
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_THEPX (Triosephosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 86/178 (48.31%), Postives = 111/178 (62.36%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 629 + AQ+ + ++ GA+TGEIS ML + + +V++GHSERR E++E V KV ALS GL I CVGE+ QRE G T +VV +QTK V+ N+V+AYEP+WAIGTGK AT A EV +R + + E A RI YGGSV N EL A+ D+DG LVGGASL Sbjct: 60 LGAQDMFWEEKGAYTGEISPLMLKEIGVKYVVIGHSERRQYFGETDEMVNKKVLSALSHGLSPIVCVGESFSQREEGKTFEVVLSQTKEALKGVTHDDIVNVVIAYEPIWAIGTGKTATAKDANEVIKAIRNTIASLYGKEKADLVRIQYGGSVKPENISELMAESDIDGALVGGASL 237
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRMK (Triosephosphate isomerase OS=Stenotrophomonas maltophilia (strain K279a) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 92/188 (48.94%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 662 AQ+ + GA+TGE+ A MLV + + ++GHSERR +ES+E V K A A GL + CVGETLEQREAG T V+A+Q + + V + ++ V+AYEPVWAIGTG+ AT QAQ+VH +R + A IA + I+YGGSV N EL AQPDVDG LVGGASL +F+ I ++A Sbjct: 62 AQDVSSNEKGAYTGEVCAAMLVEVGARYGLVGHSERRQYHHESSELVARKFAAAQHAGLVPVLCVGETLEQREAGQTEAVIASQLAPVLELVGAAGFAQAVVAYEPVWAIGTGRTATKEQAQQVHAFIRGEV-ARIDARIADSLPIVYGGSVKPDNAGELFAQPDVDGGLVGGASLVAADFLAIARAA 248
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STAS1 (Triosephosphate isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 85/202 (42.08%), Postives = 122/202 (60.40%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSAE 665 LV + AQN + + GAFTGE S L +L + +V++GHSERR I +E++E + K + G+ I CVGET E+RE+G +VV Q K + +S +V+AYEP+WAIGTGK +T A E+ +R+ + +S +A ATRI YGGSV N KE A+ D+DG LVGGASLK +F+ +++ A+ Sbjct: 52 LVNDGKAKGLQIGAQNAYFEDNGAFTGETSPVALADLGVKYVVIGHSERREIFHETDEEINKKAHAIFNHGMTPIVCVGETDEERESGKANEVVGNQVKKAVEGLSEAQLQQLVIAYEPIWAIGTGKSSTAKDANEMCAFVRQTVAELSSQTVADATRIQYGGSVKPNNIKEYMAESDIDGALVGGASLKVDDFVQLLEGAK 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEPA (Triosephosphate isomerase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 86/186 (46.24%), Postives = 117/186 (62.90%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDI 650 + QN GA+TGEIS +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + ++ ++ N ++AYEP+WA+GTGK ATP QAQEVH +RK L + SP I RI+YGGSV +N +L AQPDVDG L+GG SL EF+ + Sbjct: 69 MGTQNLSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKHGLTPILCVGESGPAREARRTFEVIAEELDVVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRKRL-SEVSPFIGENIRILYGGSVTPSNAADLFAQPDVDGGLIGGVSLNATEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSE14 (Triosephosphate isomerase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 86/191 (45.03%), Postives = 123/191 (64.40%), Query Frame = 3 Query: 102 VAAQNCWVK-KGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 V AQ+ ++ + GA TGEI++ L + V++GHSERR ++ E ++ + K A + GL + C+GETLE+R+AG T++VV Q ++ VS+ N V+AYEPVWAIGTG A+P +AQEVH +R L A + E+A R++YGGSV AN EL + PD+DG L+GGASL EF I ++A Sbjct: 60 VGAQDAAIQAEQGALTGEIASSQLADAGCKLVLVGHSERRQLIGEQDDVLNKKFAAIQASGLTPVLCIGETLEERKAGQTLEVVGRQLDSVIAEFGVSALINAVIAYEPVWAIGTGLTASPQEAQEVHAAIRAHL-AKENAEVAQGVRLLYGGSVKAANAVELFSMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_GEOKA (Triosephosphate isomerase OS=Geobacillus kaustophilus GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 91/200 (45.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIADRV-SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 659 LV+++ D + AQ GA+TGE+S ML +L + +VILGHSERR + E++E V KV A ++GL I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP A V +R + PE A A RI YGGSV N ++ AQ +DG LVGGASL+P F+ ++++ Sbjct: 50 LVQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQEQIDGALVGGASLEPASFLQLVEA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_ALKMQ (Triosephosphate isomerase OS=Alkaliphilus metalliredigens (strain QYMF) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.450e-37 Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE-FIDII 653 + AQN + GAFTGEISAEML L + ++++GHSERR NE++E V K+ AL Q L I CVGETL++REA T DV+ Q + + S +IV+AYEP+WAIGTGK A+ A V +R+ + I+ RI YGGSV N E+ + D+DG LVGGASLK + F+ I+ Sbjct: 60 LGAQNMHWEDNGAFTGEISAEMLKELGVDYILIGHSERRQYFNETDETVNKKIKKALEQKLMPILCVGETLQEREAAQTFDVIKNQITIDLEGILPDSMKDIVIAYEPIWAIGTGKTASSQDANHVIAYIRQLIQEKYDDGISETVRIQYGGSVKPENATEIMNEEDIDGALVGGASLKADAFLGIV 246 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |