CX295728
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_THETN (Triosephosphate isomerase OS=Thermoanaerobacter tengcongensis GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 88/181 (48.62%), Postives = 110/181 (60.77%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 + AQN + ++ GA+TGEIS ML + + +V++GHSERR E++E V KV ALS LK I CVGE+L QRE G T DVV QT+ VS + +V+AYEPVWAIGTGK ATP A EV +R + + A RI YGGSV N A+ D+DG LVGGASL E Sbjct: 60 LGAQNMFWEEKGAYTGEISPVMLKEIGVTYVVIGHSERRQYFKETDEMVNKKVLSALSHDLKPIVCVGESLSQREEGKTYDVVLTQTREALKGVSEEDITKVVIAYEPVWAIGTGKNATPQDANEVIKAIRNTIAELYGKDKAEMVRIQYGGSVKPDNISGFMAESDIDGALVGGASLVAE 240
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRM5 (Triosephosphate isomerase OS=Stenotrophomonas maltophilia (strain R551-3) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 92/188 (48.94%), Postives = 121/188 (64.36%), Query Frame = 3 Query: 108 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRV--SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDIIKSA 662 AQ+ + GA+TGE+ A MLV + + ++GHSERR +ES+E V K A A GL + CVGETLEQREAG T V+A+Q + + V + ++ V+AYEPVWAIGTG+ AT QAQ+VH +R + A IA + I+YGGSV N EL AQPDVDG LVGGASL +F+ I ++A Sbjct: 62 AQDVSSNEKGAYTGEVCAAMLVEVGARYGLVGHSERRQYHHESSELVARKFAAAQHAGLVPVLCVGETLEQREAGQTNVVIASQLAPVLELVGAAGFAKAVVAYEPVWAIGTGRTATKEQAQQVHAFIRGEV-ARIDARIADSLPIVYGGSVKPDNAGELFAQPDVDGGLVGGASLVAADFLAIARAA 248
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_SHEFN (Triosephosphate isomerase OS=Shewanella frigidimarina (strain NCIMB 400) GN=tpiA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.118e-37 Identity = 86/186 (46.24%), Postives = 118/186 (63.44%), Query Frame = 3 Query: 102 VAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-KPEFIDI 650 + AQN GA+TGEIS +ML + +VI+GHSERR + E++ V +K A A GL I CVGE+ REA T +V+A + + ++ ++ N ++AYEP+WA+GTGK ATP QAQEVH +R L + SP I RI+YGGSV +N ++ AQPDVDG L+GGASL EF+ + Sbjct: 69 MGAQNLSQHDFGAYTGEISGQMLKDSGCRYVIIGHSERRRMYGETSNIVAEKFAAAQKYGLTPILCVGESGPAREARRTFEVIAEELDIVIEKNGTMAFDNAIIAYEPLWAVGTGKSATPEQAQEVHAFIRSRL-SEVSPFIGENIRILYGGSVTPSNAADIFAQPDVDGGLIGGASLNSSEFLSL 253
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRSY (Triosephosphate isomerase OS=Streptococcus suis (strain 05ZYH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI-----ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 + VAAQNC+ + GAFTGE S ++L + + +V++GHSERR +E++E + K GL I C GE+LE EAG ++ V AQ A AD+V+S +V+AYEP+WAIGTGK AT AQ + +R + A+ E+A R+ YGGSVN +N E A PDVDG LVGGASL+ E Sbjct: 59 ELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTADQVAS---LVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPSNVAEYMACPDVDGALVGGASLEAE 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_STRS2 (Triosephosphate isomerase OS=Streptococcus suis (strain 98HAH33) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 86/187 (45.99%), Postives = 116/187 (62.03%), Query Frame = 3 Query: 93 DFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI-----ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKPE 638 + VAAQNC+ + GAFTGE S ++L + + +V++GHSERR +E++E + K GL I C GE+LE EAG ++ V AQ A AD+V+S +V+AYEP+WAIGTGK AT AQ + +R + A+ E+A R+ YGGSVN +N E A PDVDG LVGGASL+ E Sbjct: 59 ELKVAAQNCYFEDAGAFTGETSPKVLAEMGVNYVVIGHSERRDYFHETDEDINKKAHAIFRNGLTPIICCGESLETYEAGKAVEFVGAQVSAALKDLTADQVAS---LVIAYEPIWAIGTGKSATKDDAQNMCKAVRDVVAADFGQEVADKVRVQYGGSVNPSNVAEYMACPDVDGALVGGASLEAE 242
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU2 (Triosephosphate isomerase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 85/191 (44.50%), Postives = 124/191 (64.92%), Query Frame = 3 Query: 102 VAAQNCWVK-KGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 V AQ+ ++ + GA TGE+++ L + V++GHSERR ++ E ++ + K A ++GL + CVGETLE+R+AG T++VV Q ++ V++ N V+AYEPVWAIGTG A+P +AQEVH +R L A + E+A R++YGGSV AN EL + PD+DG L+GGASL EF I ++A Sbjct: 60 VGAQDAAIQAEQGALTGEVASSQLADAGCKLVLVGHSERRQLIGEQDDVLNKKFAAIQAKGLTPVLCVGETLEERKAGQTLEVVGRQLDSVIAEFGVNALVNAVIAYEPVWAIGTGLTASPQEAQEVHAAIRAQL-AKENAEVAQGVRLLYGGSVKAANAVELFSMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_PSESM (Triosephosphate isomerase OS=Pseudomonas syringae pv. tomato GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 85/191 (44.50%), Postives = 122/191 (63.87%), Query Frame = 3 Query: 102 VAAQNCWVK-KGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK-PEFIDIIKSA 662 V AQ+ ++ + GA TGEI++ L + V++GHSERR ++ E +E + K A + GL + C+GETLE+R+AG T++VV Q ++ + + N V+AYEPVWAIGTG A+P +AQEVH +R L A + E+A R++YGGSV AN EL + PD+DG L+GGASL EF I ++A Sbjct: 60 VGAQDAAIQAEQGALTGEIASSQLADAGCKLVLVGHSERRQLIGEQDEVLNKKFAAIQASGLTPVLCIGETLEERKAGQTLEVVGRQLDSVIAEFGIGALVNAVIAYEPVWAIGTGLTASPQEAQEVHAAIRAQL-AKENAEVAQGVRLLYGGSVKAANAVELFSMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DESVV (Triosephosphate isomerase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 86/182 (47.25%), Postives = 118/182 (64.84%), Query Frame = 3 Query: 96 FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 F + Q+ + GA+TGEI+ ML++ WV+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG DV+A Q + +AD +++ ++V+AYEPVWAIGTGKVA P + E H +R L A + AA RI+YGGSV N EL + +VDG LVGGASL+ Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNVDGLLVGGASLQ 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_DESVH (Triosephosphate isomerase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=tpiA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 86/182 (47.25%), Postives = 118/182 (64.84%), Query Frame = 3 Query: 96 FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTK-AIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLK 632 F + Q+ + GA+TGEI+ ML++ WV+ GHSERR IL E +E V K A++L GL+V+ C+GE L++REAG DV+A Q + +AD +++ ++V+AYEPVWAIGTGKVA P + E H +R L A + AA RI+YGGSV N EL + +VDG LVGGASL+ Sbjct: 61 FAIGGQDVYPATEGAYTGEIAPGMLLDAGCGWVLTGHSERRHILGEDDETVARKTAFSLKAGLRVVLCIGEKLDEREAGRLEDVLAHQLQVGLADVDATYVPQSLVVAYEPVWAIGTGKVAGPAEVVEAHALVRSLLEARYGRD-GAAIRILYGGSVKPDNAAELLSLDNVDGLLVGGASLQ 241
BLAST of CX295728 vs. ExPASy Swiss-Prot
Match: TPIS_BACST (Triosephosphate isomerase OS=Bacillus stearothermophilus GN=tpiA PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 9.296e-37 Identity = 91/200 (45.50%), Postives = 123/200 (61.50%), Query Frame = 3 Query: 69 LVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQT-KAIADRV-SSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLKP-EFIDIIKS 659 LV+++ D + AQ GA+TGE+S ML +L + +VILGHSERR + E++E V KV A ++GL I C GE+LE+REAG T VVA+Q KA+A V+AYEP+WAIGTGK +TP A V +R + PE A A RI YGGSV N ++ AQ +DG LVGGASL+P F+ ++++ Sbjct: 50 LVQAADGTDLKIGAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGLIPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPEDANSVCGHIRSVVSRLFGPEAAEAIRIQYGGSVKPDNIRDFLAQQQIDGPLVGGASLEPASFLQLVEA 249 The following BLAST results are available for this feature:
BLAST of CX295728 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX295728 ID=CX295728; Name=CX295728; organism=Citrus clementina; type=EST; length=720bpback to top |